Clupea harengus (Atlantic herring): 105894807
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Entry
105894807 CDS
T09045
Symbol
cep290
Name
(RefSeq) centrosomal protein of 290 kDa
KO
K16533
centrosomal protein CEP290
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105894807 (cep290)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105894807 (cep290)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
105894807 (cep290)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
105894807 (cep290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
Motif
Other DBs
NCBI-GeneID:
105894807
NCBI-ProteinID:
XP_031417585
Ensembl:
ENSCHAG00000023128
UniProt:
A0A6P8F0L0
LinkDB
All DBs
Position
3:complement(396034..459371)
Genome browser
AA seq
2189 aa
AA seq
DB search
MTQSVKVMLDWNKIGNVDPEELENDDEELVDTLLQVEQRDIQEKEATSLVQLFRIAQSLL
KIKCQELSFAYEMIEKAGVDQARLENAFQTKVSKLESELKMVNRSAGGRDTRFLRDEIRQ
LEGHLERKEKELVQLDKEMMKERKTNEELSTRVEGTEDKNRTLRRENDQLRQDVEFYRRE
LEQRVPVQSKDQSLEAQRRLTLSNRQLYQCMEDLQRAEDETAHLKTQSDQMQKNLEESVK
EMEKMTDEYNKMKIIVQQSDSMMDQLRRDRDHAKTQVRELMDQIQRRAEEDDPVMAAVSA
KVEEWKRVLSEKDDEVLEYQRMNRELRDKLRASQMDTDKNNLLALQQAVQERDHQIKMLS
DQVEQYTNEMEKNTELIEELKKPLRKERGPLTAVQLRRMEGLQTKVTAAERKALEAEHQA
ELAEKDARLKDKELSDTLTRIRVYESGTDGLGAAIAEIKECKNQTAIRDAEARAMTREIN
TLEMRMNDLLDQNEALRERLGLNQEEEVDLTEFRRSKALKQRQYKAENQVLMKEIERLEE
DRLDLKMQLRAMVKEKGMSSEPMPNIYTPRETSGASTDDHIKTMVCLLFLIDTPQNEHLR
MELNNKQIELELKEKESSEFKAKFNEMLNENKHLEEGIKEILGALQDNQQRTHTISVPCL
ERLVTALEMKNTEGAPESSLQLKMQVDTLTGRNHELRQEMRGVRDDAAQTLRELVMASEK
VMRLESELETLRKSNETKAVFKAVCIPEELTPSNVDAISSLNDYAVHLLLEVKDKEDTCK
RLQVALKEYRRKLAVIRHQQGLLYEEYQSEREAWQKERESLKEAKNKLEEQRERDEVKIK
EFTHWLEVLEQHPTEIKRGISEASRKMTVLRVNEKSLTRYCTTLLELEQHLRKENNKLKD
DSVKMEMSVTERMSYLQRYKDMAVFKIAALQKALDNSVPSPELEKAHKQYINLTVKYRDL
LQKDNHLVQRATALEHLQQENVSLHEHISALNKELHINRERIHVLEQAWDHTHSQDDSRA
EKATMTNGEIVSVSKKMATLEMKELNERQRAEHAQRMYEQLRDSLRQVEQRNLDLENKFV
EVTKQNLDSQRVEQELRDELANSVSAAVNDRDQKCITDHERTEAEMKMEISKLQEVANVA
KMQVSALEARQLSREKEIEALRRQTLEYQAQSDEKALIAKLYQHIVALQLSETTALCRLE
STTNQLRKLEAQMLRAEQQLDEKEKTLWYVRHSAHGQAKHLRQTIQLLRRQFCGALPLAQ
QERSFQTMRHLQEDRDQVRQEALRAEEQRRSLEGKAKELELKLKGLEDLTTTLKDSKGAQ
KVIEWHKKLEESRLLEMKRSREVGIQKEEIRYLRNVVEEQERSISALEDDHIQERKLHEE
RQLLWEGREVEFERQMEHFEKQQNELYDAHQKTGGALPDPTLPLSQQLNHSLTKIKELVR
AVSEKQATCNSLEEKLKERDEAFWKSEQNVLSRDKVINELRLRLPAVAEKEKILANLSRQ
DNNPESQPAFKVAQQTINSLQGRLNQKEEVLKKYQHLLSRTRQEQEDIAQKHKEDMQTLQ
QKLETLTEASLGHLKQTALDLMKKPFITIPTTKHLARLAELEQTVAEQENSLTTLMDKLK
VRTAELDKQRHIMDLQTRKHDMDKDKLEGNHSAQKRSLEQEAEELRAQAAQMADQLHCLQ
TELDSQREANVRAPSQTMKNLVDSLKAQLCLKEKQQRALSKALQELRAEMTSHAEQQIIA
NVTQREENFNIQQIVDKHTKELQGRIQELSEELLKVREGAGVSQSRESSMRQAHDGLMGE
LQKSRRAHAKLQAEKALLEDKVANLKQRVKALSSNLQQSQNEGEGRGSTAAGLRQRISKL
ETELDRTRTSEQPEGALGREEKEKDKMSKEEMTRWDEGKRWHARLEKIRNTLKEKEREVE
TLSKQLNTIKDLYTRVEGEKIHLQKKLSRSRGVTADQVVGARSRGVTADQVVGARSLESD
KEIEELRRRNSQLERQIQTIKQQQALPRDAAIEDMHLRNRYLEDRILCLETQLSREASTL
GPYVESPTQKEHKLQEENLRLSSKNLELCFQLEQATKDLPRLKDQVSDLKDMCNVLIKEK
AALEAKLGHIRKAGGSGKTAPELEKTIGLMKKVVERVQRENEALKKVSAPAMQEQLCALE
QEHDKLKAQYDQLKGKMQTELKKEGWRKL
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatctgtaaaggtaatgttagactggaataaaattggaaatgttgatccagag
gaactggaaaacgacgatgaggaacttgtcgacacattgcttcaggttgagcagagggac
atacaagaaaaagaagccacatctttagtccagcttttcagaatagctcagtctctcctg
aagatcaaatgtcaagagctttcatttgcgtatgagatgatcgagaaggctggagttgat
caggcaagactggagaatgcatttcagaccaaagtatccaaactggagagtgaactgaag
atggtgaatcgatccgcggggggtagagatacacgtttcctgcgggatgagatccgccag
ctggaggggcatttggaacgcaaggagaaggagctggttcagctggacaaggagatgatg
aaggagaggaagaccaacgaggagctatcgaccagagtggagggcaccgaggataagaac
aggactctgagacgggagaatgatcagctccgtcaagatgtggaattttatcgcagagaa
ctggagcagagggtgcctgtccagtccaaagaccagagccttgaggcccagagacgcctc
accctatccaaccgccagctctaccagtgcatggaggacttacagagagccgaggatgaa
acggctcatttgaagactcagagtgatcagatgcagaagaatctcgaggagtctgtgaag
gagatggagaagatgacggatgaatacaacaagatgaagatcatagttcagcagtcagat
tccatgatggaccagctgcggagggacagagaccatgccaagactcaggtgagagaactg
atggaccaaatccagaggagggctgaagaggacgatccagtcatggctgcagtcagcgct
aaagtggaggagtggaagagagtgttatctgagaaggacgacgaggtcctggaataccaa
cggatgaatcgggaactgcgagacaaactgagggcatcacaaatggacaccgataagaac
aacctattagctctccagcaggctgttcaagaaagggaccaccaaatcaagatgctgagt
gatcaagtggagcaatacacaaatgaaatggagaaaaacacagaactgattgaagaactg
aagaaacccttaaggaaagagagaggtcctctcactgctgtgcagctgcgcaggatggag
ggactccagacgaaggtcaccgcagcggagaggaaggccttggaggctgagcaccaagca
gaattagccgagaaagatgcccgactcaaggacaaggagctcagcgacaccctcactcgc
ataagagtctatgagtctggcacagatggcttgggagctgccatagctgagatcaaagag
tgcaaaaaccagacggcgatacgagacgctgaggccagagccatgaccagagaaatcaac
acgttagagatgaggatgaacgacctgctggaccagaacgaggccttgagagagagactg
ggtctcaaccaagaggaagaagtggacttgactgaatttcgaaggtctaaggctttaaag
caaaggcagtataaagcagaaaatcaagtattgatgaaagagatagagagactcgaggag
gacagacttgatctcaagatgcagttaagggccatggtgaaggaaaaagggatgagcagt
gaacctatgcctaatatctacactccaagagagacctcaggtgcatccaccgatgaccac
ataaaaacaatggtatgtctgctttttttgattgacactccacagaatgaacatcttcga
atggagcttaataacaaacagatcgaactggaactgaaagaaaaggaatcatctgaattt
aaggccaaattcaatgaaatgttaaatgaaaataagcacctggaagaaggcatcaaggag
atcctgggggctctacaggacaaccagcagaggacacacaccattagtgttccctgtttg
gagaggctggtgactgctttagaaatgaaaaacacagaaggagctcccgagtccagtctg
caactgaagatgcaggtggacactttaacaggccggaaccatgaactgagacaggagatg
agaggtgtgagggacgacgcagcacagactctgagggaactggtaatggccagtgaaaag
gttatgcgtttggagagtgaattagaaacactgaggaaatctaatgagaccaaagcagtc
tttaaggctgtgtgcattcctgaggaattgacaccatctaatgtggatgccatcagctct
ttgaatgattatgctgttcatcttctgctggaggttaaagataaagaagacacatgcaag
cgacttcaggtggctttaaaggagtacagaagaaaactagccgtgattcggcaccagcaa
ggtcttctatatgaagaatatcaaagtgagagggaagcgtggcagaaggagagagagtca
cttaaggaggcaaagaataagttggaagagcagcgagagcgggatgaggtgaagatcaaa
gagttcactcactggcttgaggtgttagagcagcaccccacagagatcaagagagggatc
tcggaggcgtctcgaaagatgaccgtgctccgcgtgaacgagaagtccctcaccaggtac
tgcaccactctgctggaactggagcagcacctccggaaggagaacaacaagctcaaagat
gattctgttaaaatggaaatgtctgtgactgagaggatgtcttacttacaaagatataag
gacatggctgttttcaaaatagctgccctccagaaggctctggataatagcgtcccttcc
ccggaacttgagaaagcccacaaacagtacatcaacctaacggtcaaatacagagacctc
ctgcagaaagacaaccatctcgttcagagggccactgcgctcgaacatttacagcaagag
aatgtgtcccttcatgaacacatcagcgccctcaacaaagaactgcatatcaacagggag
aggatccacgtgctggaacaagcgtgggatcacacacactctcaagatgacagcagggct
gaaaaggcgacgatgacgaacggtgaaatagtgtctgtttctaaaaagatggctactctg
gagatgaaggagctgaacgagcggcagagggcggagcacgcccagaggatgtacgagcag
cttcgcgattctctaagacaagtggaacaacgcaatcttgacctggagaacaaatttgtg
gaggtgaccaagcagaacttggattcccagagagtggagcaggagctgcgtgatgagttg
gccaacagcgtcagtgcggctgtgaacgaccgcgaccagaagtgcatcactgatcacgag
aggacagaggctgagatgaagatggagatctccaagttgcaggaagtagccaacgtggcc
aaaatgcaggtgtctgcactggaagccaggcagctgtccagagaaaaggaaattgaagcg
ctgaggagacagaccctagagtaccaggcccagtcggatgagaaggccctcatagccaag
ctctatcagcacattgttgccttgcaattaagtgaaacaaccgctctgtgtaggctggag
agcaccactaaccagcttcgtaaactcgaggctcagatgctgcgggctgaacagcagctg
gacgaaaaggagaaaaccctgtggtacgtccgccacagtgctcacggccaggccaaacac
cttcggcagacgatccagttgttgcggaggcagttttgtggtgcgcttcccctggcgcag
caggagaggtctttccagaccatgaggcaccttcaggaggatcgcgatcaggtgagacag
gaggcccttcgggccgaagagcagaggcggagcttagaaggcaaggccaaagagctggag
ctcaaactcaaaggactggaggacctcacaaccactcttaaggattccaaaggggctcag
aaggtgattgagtggcacaagaaactggaggagagccggctgctggagatgaaacgcagc
agagaagtgggtattcagaaggaggaaatcagatacttgagaaatgtggtagaggaacaa
gaacggtccatcagtgccttggaggatgatcacattcaggagagaaagcttcacgaggag
cggcagctgctttgggaaggaagggaggtggagtttgagcgccagatggagcactttgag
aaacaacagaatgaactttatgatgctcatcaaaagacaggtggcgccctcccggatcca
accctgcctctctcccagcagctcaatcattctctgacaaaaattaaggagcttgtccgc
gctgtttcggaaaaacaagcaacctgcaattctctggaagagaaactgaaagagagggac
gaggccttctggaaatcagagcagaatgttctctctcgagacaaggtcattaatgagctg
cgcctccgcttgccagcagttgctgaaaaggagaagatcttagcgaacctcagcagacag
gacaataatcctgagagccaaccagcattcaaagtggctcaacaaactataaacagcctt
cagggacgcttgaaccagaaagaagaagtcttgaagaagtaccagcaccttctgtccaga
acaagacaagaacaagaagacattgcacagaagcacaaagaggacatgcagactcttcag
cagaagcttgaaacacttacagaagcttcattaggtcaccttaaacagacagctctggac
ttaatgaagaaaccctttatcaccataccaaccacaaaacacctggcacgtttagctgaa
ttggagcagactgtggctgagcaagaaaactctctcacaaccctcatggataagctgaag
gtcaggactgcagagctggacaaacagagacatatcatggacctccagaccaggaagcat
gacatggacaaagacaagctggaagggaaccactcagctcagaagagatccctcgaacag
gaagcggaggagctccgagcccaggctgctcagatggccgatcaactgcactgcctccag
acagagctggactcccagagagaggccaatgtccgcgcaccgagccaaaccatgaagaac
ctggtggacagtctgaaggctcaactctgcctcaaggagaagcaacagagggctttgagc
aaggcacttcaagagctgcgtgccgagatgacctcccacgccgagcagcagatcatcgcc
aatgtcacacagagagaagagaacttcaatattcagcagattgttgacaaacacaccaaa
gagttgcaggggcgtatacaggagctgagcgaggagctcctgaaggtgagagagggtgcg
ggcgtgtcccagagcagggagagctccatgaggcaggcccatgacggcctgatgggagag
ctccagaagagccgcagagcgcacgccaaactgcaggcggagaaggcgctcttggaagac
aaggtggctaatctgaaacagagagtgaaggcgctcagcagcaacttgcagcagagtcag
aatgaaggtgaaggcagaggttccacagcggcggggttacgacagagaatctccaaactg
gagacggagctggacagaaccagaacatcagagcagccagagggagcgcttggaagagag
gagaaggagaaggacaagatgtcaaaagaagagatgacgaggtgggacgagggtaagagg
tggcatgccaggctggagaagatccggaacacgctgaaggagaaggaaagagaagtggag
actttgtcaaaacagttgaataccatcaaagacctctacaccagggtggagggggaaaag
attcatctacagaagaaactatcacggagtcggggagtgactgcagatcaggtcgtggga
gcacggagtcgtggagtgactgcagatcaggtcgtgggagcacggagtctggagtctgac
aaggagatcgaggagctgaggaggagaaattctcaactggagcgacagattcaaactata
aaacagcaacaggctttaccgagagatgccgcaatcgaggacatgcaccttaggaatcgc
tatctcgaagacaggatcctgtgtctggagacccagctctccagagaagcatctacattg
ggaccgtatgtcgagtctcctacacagaaagagcataaactacaagaagaaaacctccgg
ctctcttctaaaaacctggagctctgcttccagctggagcaagcaaccaaagacttgccc
agattaaaggaccaagtgtctgatctcaaagacatgtgtaacgttctcattaaggagaag
gctgcattggaggcgaaacttgggcacatccgcaaggcagggggcagtgggaagacggcc
cctgagctggagaagaccatcggtctgatgaagaaggtggtggagagagtccagcgggaa
aacgaggctttgaagaaggtctccgccccagccatgcaggagcagctgtgtgcacttgag
caagagcatgacaaactcaaggcacaatatgatcagctcaaggggaaaatgcaaacggag
ttaaaaaaagaagggtggagaaaactatga
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integrated database retrieval system