KEGG   Clupea harengus (Atlantic herring): 105895937
Entry
105895937         CDS       T09045                                 
Symbol
gnb1b
Name
(RefSeq) guanine nucleotide binding protein (G protein), beta polypeptide 1b
  KO
K04536  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04081  Hormone signaling
char04082  Neuroactive ligand signaling
char04371  Apelin signaling pathway
char04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    105895937 (gnb1b)
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    105895937 (gnb1b)
   04081 Hormone signaling
    105895937 (gnb1b)
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    105895937 (gnb1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105895937 (gnb1b)
   04031 GTP-binding proteins [BR:char04031]
    105895937 (gnb1b)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105895937 (gnb1b)
  Exosomal proteins of colorectal cancer cells
   105895937 (gnb1b)
  Exosomal proteins of melanoma cells
   105895937 (gnb1b)
GTP-binding proteins [BR:char04031]
 Heterotrimeric G-proteins
  Beta Subunits
   Beta [OT]
    105895937 (gnb1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_like Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR75_2nd DUF4407 Myc-LZ CaM_bind
Other DBs
NCBI-GeneID: 105895937
NCBI-ProteinID: XP_012678091
Ensembl: ENSCHAG00000020570
UniProt: A0A6P3VQB6
LinkDB
Position
5:complement(25702735..25723376)
AA seq 340 aa
MSELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYA
MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
CSIYSLKTREGNVRVSRELAGHTGYLSCCRFVDDNQIVTSSGDTTCALWDIETGQQTTTF
AGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSL
KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgagtgaactggaccagttacgccaggaggctgagcagctcaagaaccagatccgagat
gccaggaaggcttgcgccgatgccacgctctcacagatcaccgccaacattgaccccgtt
ggacggattcagatgcgcacaagacgaacattgagggggcatcttgcaaagatctatgcc
atgcactggggcactgactccaggctcctggtcagtgcctctcaggatgggaagctcatc
atctgggacagttataccacaaataaggtccacgccatcccactgcgctcttcctgggtg
atgacctgtgcctacgcgccctcagggaactacgtggcctgcggtggcctggacaacatc
tgctccatctacagcctaaagacccgcgagggcaacgtgcgcgtcagccgcgagctcgcc
ggccacacaggctacctgtcttgctgccgtttcgtggatgacaaccagattgtgaccagc
tctggtgacaccacgtgtgccctgtgggacatagagaccggccagcaaaccaccacgttt
gcgggtcacaccggtgacgtgatgagcctctccctggccccggacaccaggttattcgtc
tcgggcgcgtgtgacgcctccgccaagctctgggacgtgcgggagggcatgtgtcggcag
accttcactggccacgagtctgacatcaacgccatctgctttttccccaacggcaatgca
ttcgccaccggctcggacgacgccacctgcaggctgtttgacctgcgtgccgaccaggag
ctgatggtctactcccatgacaacatcatctgcggcatcacctccgtggccttctccaag
agcggccgtctcctgctggccggatacgatgacttcaactgcaacgtgtgggactctctc
aaggctgaccgtgccggcgtgctggccggccatgacaaccgcgtgagctgcctgggcgtg
accgacgacggcatggccgtggccaccggctcctgggacagcttcctgaagatctggaac
tga

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