KEGG   Clupea harengus (Atlantic herring): 105896149
Entry
105896149         CDS       T09045                                 
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
  KO
K03158  tumor necrosis factor receptor superfamily member 1A
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04010  MAPK signaling pathway
char04060  Cytokine-cytokine receptor interaction
char04150  mTOR signaling pathway
char04210  Apoptosis
char04217  Necroptosis
char04920  Adipocytokine signaling pathway
char05132  Salmonella infection
char05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    105896149 (tnfrsf1a)
   04150 mTOR signaling pathway
    105896149 (tnfrsf1a)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    105896149 (tnfrsf1a)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    105896149 (tnfrsf1a)
   04217 Necroptosis
    105896149 (tnfrsf1a)
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    105896149 (tnfrsf1a)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    105896149 (tnfrsf1a)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105896149 (tnfrsf1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:char04050]
    105896149 (tnfrsf1a)
   04090 CD molecules [BR:char04090]
    105896149 (tnfrsf1a)
Cytokine receptors [BR:char04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   105896149 (tnfrsf1a)
CD molecules [BR:char04090]
 Proteins
  105896149 (tnfrsf1a)
SSDB
Motif
Pfam: TNFR_c6 Death LapA_dom
Other DBs
NCBI-GeneID: 105896149
NCBI-ProteinID: XP_012678325
Ensembl: ENSCHAG00000011522
UniProt: A0A6P3VQ80
LinkDB
Position
11:complement(18393993..18401493)
AA seq 421 aa
MDRGRQMSTRGTNFGPCPLIFVLLVLQSHALMRLEAAAGPWLSSTSDTTPTNTSHEVTCD
EDKYPHSGKQFCCNKCIPGFKLLQECQEHKQTKCTKCENGTFQQSANYYPNCNKCNKCKE
NEEEVIKCDSKTDRVCKCKTRYYKHKLNELDHECRLCKKCGSGEREKSPCKPENNTVCEC
KYNHYQVNSTTCKLCKECGTGCSHLCSTGPTTTVVGPKTKHPDDLVSLPLVLVVVVTAVV
TAVSVILFLVTSMVIKRKLKLAKNSPAGSESPDPCELDTSSESLIFSTAESNINSDNESV
PIPTEVHSEMQNALPDCVPREIKINKFIYSVLEVVPVARVTELVRRLGVKEQDIERARRD
NVISIYEAQYQMLKLWSDSGIRGGASTLPRALLQELLDTLREMGLGGCGESLEIEYGLVQ
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacagaggtcgccagatgtcaacacggggaaccaactttggaccgtgtcctctgatt
ttcgtgcttctggtcctccagtcccatgctttgatgaggctggaggctgctgcagggcca
tggctgagctcgacctcagatactactcccaccaacaccagccacgaggtcacttgtgac
gaagataagtaccctcactctgggaaacagttctgctgtaacaagtgcattccaggattt
aaattgcttcaggaatgccaggaacataagcagaccaagtgcacaaaatgcgagaatggg
acattccagcaatcagcaaactactatccaaactgcaacaaatgcaataaatgcaaagag
aatgaagaagaagttatcaaatgcgacagcaagacggacagagtctgtaaatgtaagaca
cgttactacaaacataaacttaatgaactagaccacgaatgtcgtctctgcaagaagtgc
ggctctggagagagagaaaaatcgccttgtaaaccagagaacaacacagtatgcgagtgt
aaatacaaccattatcaagtgaactccacaacctgtaaactttgtaaggagtgtggcaca
ggatgctcccacctttgttccactggtccgactacaacggttgttggtccgaagactaaa
catcctgacgatctagtgtcccttccacttgttctggtagttgtggttactgcggtggtg
actgcagtgtcagtgattttatttctggtgacctccatggtcatcaaacgcaaattgaag
ctggcgaaaaactctccggctggctcagagtctcctgacccttgtgaattagacacttcc
tctgagtctcttatcttcagcacagctgagagcaacatcaacagtgacaatgagagtgtt
cctattccaactgaagtccacagtgagatgcagaatgctttacctgactgcgtaccacga
gagatcaaaatcaacaaattcatctactcagttctggaggtggttcctgtggctcgggtc
acagaactcgtccgtcgtctcggcgtgaaagagcaggacatcgaaagggcgagacgggac
aacgtcatctccatctatgaggcccagtaccagatgctgaagctgtggagcgacagcggg
atacgaggcggcgcctccaccctccctcgggctctactgcaggagctgctggacaccctg
agagagatgggactgggagggtgcggagagagcctggagatcgaatacggcctagtgcaa
gcatga

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