Clupea harengus (Atlantic herring): 105897319
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Entry
105897319 CDS
T09045
Symbol
b4galnt1a
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1a
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00600
Sphingolipid metabolism
char00604
Glycosphingolipid biosynthesis - ganglio series
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105897319 (b4galnt1a)
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
105897319 (b4galnt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105897319 (b4galnt1a)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
105897319 (b4galnt1a)
Glycosyltransferases [BR:
char01003
]
Glycan extension
Glycolipid
105897319 (b4galnt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Motif
Other DBs
NCBI-GeneID:
105897319
NCBI-ProteinID:
XP_031421622
Ensembl:
ENSCHAG00000002325
UniProt:
A0A6P8FEF6
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Position
4:complement(2382082..2404210)
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AA seq
529 aa
AA seq
DB search
MWSQKKKVLMAMVTLGLAAALIRSWTPRPYNSVDVRPKQETKMEKLLEDRLLLSEHKYDD
IPYRVKESVLGLLARNGCVCEGETRSINLPYAHLLFPRVSAQNLHTAFKVSELEEVKRRR
AQEYHSFQMRSQTSADLLIVAEANSPLQYPTQGVEVRPLKTILVPGLALKEKTRERYTVN
LTATMGTFDIAAFVDDVTMKGEGEMQMALSSRYLSALNRQLQFVTYTNTLFHPNTADTVQ
FVTDGHQSFFTVKVRHGVTPKLYNPGPKEEYNVSALVTIATKTFLRYDKLQDLIDSIRQF
YPTITIVIADDNEHPKPVIGPYIEHYTMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFIFT
ANTKLEKLVDVLESTTVDLVGGAVREVTGYTASYRQTFSLEQGGEEGDCLHIRRGFHHAI
KGFPNCVVADGVVNFFLARTDKVQQVGFDPRLARVAHLEFFIDGLGVLHVASCDDVVVNH
ASKIKLPWGQSESDRAYYKFRYPPSSSDTAQTRSSLFYFKNRFQCLTHN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcccagaagaagaaggtgttgatggccatggtcaccctggggctggcggcagct
ctgatccgctcctggacccctaggccctacaactcagtggacgtgcggccgaagcaggag
acaaagatggaaaagctgctggaggaccgactgctcctctcggagcacaaatacgacgac
atcccttaccgggtcaaggagagtgtcttgggtctcctggcccgtaatggctgcgtgtgt
gagggggagacgaggagcatcaacctgccctacgcccacctgctgttccctcgggtgtca
gcgcagaacctccacacggccttcaaggtgtcggagctggaggaggtgaagaggcgccgg
gcccaggagtaccacagcttccagatgaggtcacagacttcagcagacctgctaattgtt
gctgaagctaatagccccctgcaataccccacccagggtgtagaagtccgacccctcaag
accatcctggtacctggactggcccttaaagagaagaccagagaacgctacacagtgaat
ttgacagcaacaatgggcacttttgatattgctgcatttgtggatgatgtcaccatgaaa
ggcgagggggagatgcagatggctttgtccagccgatacctctcagccctgaacaggcag
ctgcagtttgtcacctacacaaacaccctgttccacccgaacaccgccgacacagtgcag
tttgtgactgacggacaccaatctttcttcactgttaaagtccgtcacggcgtcacccct
aagctctataacccaggacccaaagaagaatacaacgtgagtgcccttgtcaccatagcg
acaaagacgtttttgcgttatgacaaactccaggatttgattgacagcatacgccagttc
tacccgactatcaccattgtaattgccgatgacaatgagcatcctaagccagtgatcggt
ccctacattgagcattacaccatgccatttggaaaggggtggtttgcagggcgtaacttg
gcagtgtcccaggtcaccaccaagtatgtgctgtgggtggacgatgacttcatcttcact
gccaacaccaagcttgagaagctggtggatgttctagagagcaccaccgtggacctggtc
ggcggtgcagtgagggaagtgacgggctacacggcctcctaccggcagaccttctccctg
gagcaaggcggagaggagggggactgtctgcacatacgccggggcttccaccacgccatc
aagggttttcccaactgcgtggtggcagacggggtggtcaacttcttcctggcgcgcacc
gacaaggtccagcaagtgggcttcgaccctcggctggctcgggtggctcatttggaattt
ttcatcgatggccttggggttctccacgtggcctcttgcgatgacgtcgtcgtcaaccac
gcctcgaagatcaaactcccgtgggggcagtccgagagcgacagggcatactacaagttc
cgctacccgccgtcctcttcggacactgcccagaccaggagcagcctgttctatttcaag
aaccggttccagtgtctcacccacaactga
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