Clupea harengus (Atlantic herring): 105897596
Help
Entry
105897596 CDS
T09045
Symbol
fbxl4
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10270
F-box and leucine-rich repeat protein 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105897596 (fbxl4)
03029 Mitochondrial biogenesis [BR:
char03029
]
105897596 (fbxl4)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105897596 (fbxl4)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105897596 (fbxl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_At5g56370
F-box
LRR_8
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_14
F-box_4
DUF5902
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
105897596
NCBI-ProteinID:
XP_012680002
Ensembl:
ENSCHAG00000006254
UniProt:
A0A6P8FWN4
LinkDB
All DBs
Position
11:19986029..19997999
Genome browser
AA seq
620 aa
AA seq
DB search
MFPMLTLLSMFYYICLRRRCRSGSRSEALGSRRAVELAQRASGPAGGSSGGGELEQYAKE
VVDFSSHYGSENSMSYTMWNLAGAPNVYPSSGDFTQTAVFRTYGRWWEHCPSAAPPYRRT
PRSFHSKDYLELAFEEPVYPTAVEVLETYHPGAVVQILACSLNPFSQNPPSEVRWEVLWS
GEPSKAPTHQSRQFSPTIRQLSFPTNLLRVEVNSSLMDYYTELDAVILRGVRERPMLALY
KMPLIDMNDLSDGEDEVVISSQRHPLAGDGKHYTGNGYFDKLPYELIQLIVSHLTLPDLC
RLAQSCKLLQQHCADPLQYLQLSLQPYWATLTDASLVHLQPRCALLQRLNMSWTGNRGAI
TSTGFCSFLKVCGSSLVSLELSCCHFLNEASMEVISQTCPRLQQLNLASCDRLQPQAFSH
IAKLSSLRRLVLYRTKIEQTALLSILTFCAELQNLNLGSCVRIQDYDVVASMLSVRCRRL
RSLDLWRCGSLTERGLAELASGCRLLEELDLGWCSTLQSSSGCFQHMARCLPRLRKLFLT
ANRTVCDSDLDELAACCPRLHHVDILGTRMVSPASLKKLLQSCPELKLVDVSFCSQIDTR
AVQELSTLFPNVAIKKSFTQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttccctatgctaaccctgctgagcatgttctactacatctgtctgcggcgccgctgt
aggagtggttcccggagcgaggcgctgggcagccggagggccgtggagcttgcgcagaga
gcctccggtccggcagggggcagtagcggcggcggtgagctggagcagtacgccaaagag
gtggtggacttcagctcacactatggcagtgagaacagcatgtcgtataccatgtggaac
ctggcaggggcgcccaatgtctacccaagctcgggtgacttcacacagacggccgtgttc
aggacgtatgggcgctggtgggagcactgccccagcgcggcacccccgtaccggcgcact
cccagatccttccacagcaaggactacctggagctggccttcgaggagcccgtatacccc
acggccgtggaggtgctggagacctaccacccaggggcagtggtgcagatcctggcctgc
tcgctcaacccgttctcccagaacccgcccagtgaggtccgatgggaggttctgtggtca
ggggagcccagtaaggcccccacccaccagtctcgccagttttccccgacgattcgtcag
ctgagcttccccaccaacctgctgcgggtggaggtgaatagcagcttgatggactactac
acggagctggacgcagtcatcctgcgcggggtgagggagcggcccatgctggccctctac
aagatgcccctcatcgacatgaacgacctgagcgacggcgaggacgaggtggtcatcagc
agtcagcgccacccgctggccggagatggcaagcactacacaggaaacggatacttcgac
aagctgccgtacgagctgatccagctgattgtgagtcacctgactctgccggacctgtgc
cgcctggctcagagctgtaagctcctgcagcagcactgcgctgacccgctccagtacctg
cagctgagcctgcagccgtactgggccacgctcaccgacgcctcgctggtgcacctgcag
ccccgctgcgccctgctgcagcgcctcaacatgtcctggaccggcaaccgaggagccatc
acctccacaggcttctgcagtttcctaaaggtgtgcggctcgagcctggtgagtctggag
ctgtcgtgttgtcactttctgaacgaggcgagcatggaggtgatctcccagacctgcccg
cgcctccagcagctcaacctggcctcctgtgaccgcctgcagccccaggccttcagccac
atagccaagctcagcagcctgcgccggctggtgctctaccgcaccaaaatagagcaaaca
gccttgctgagcatcctgaccttctgcgctgagcttcagaacctcaacctgggcagctgt
gtccggatccaggactatgacgtggtggcgagcatgctgtcggtgcggtgccgccgcctg
cgctccctggacctgtggcggtgcgggagcctgacggagcggggcctggcggagctggcg
tcgggctgccgcctgctggaggagctggacctgggctggtgctccacgctgcagagcagc
tccggatgcttccagcacatggcccgctgcctgccccgcctgcgcaagctcttcctcact
gccaaccgcaccgtctgcgactccgacctcgacgaactggccgcctgctgcccccgactg
catcatgtcgacatactgggcacacggatggtgagccccgcctccctgaagaagctcctc
caatcatgtccagagctaaagctggtggacgtgtccttctgttcacaaatcgacactcga
gccgtccaagagctctctactctgtttcccaatgtggccatcaagaagagctttacacag
tga
DBGET
integrated database retrieval system
