Clupea harengus (Atlantic herring): 105898037
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Entry
105898037 CDS
T09045
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105898037 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105898037 (nr1h4)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105898037 (nr1h4)
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
105898037 (nr1h4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105898037
NCBI-ProteinID:
XP_012680490
Ensembl:
ENSCHAG00000020615
UniProt:
A0A6P3VT66
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All DBs
Position
3:3811747..3828417
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AA seq
486 aa
AA seq
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MNDWVGPDVNVVGPLQVPNGDGFSLSESSHFFDILAEQGSPLLQDPEALPFTSYPSMQYP
SMEPPMASPSYYPSQHYYPPYSAEDWYSSPSLYELRKGPLGAASFEAEMEETSVFVPTVC
KRARHTSQPGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGTC
EMDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKGSSEESTAGDPEGPDC
GDTKQVTSTTRLLKEKVELSQEQQALLNYIVDAYNKHRIPPDQAKKLLQEQFNAEENFQL
LTEMATSHVQVLVEFTKNIPGFQSLDHEDQIALLKGSAVEAMFLRSAQVFTRKLPQGHTE
VLEDRIRKSGISEEFITPMFNFYKSIGELQMLQEEHALLTAITILTPDRPYVRDQQAVEG
LQETMLEVLRKFCKLQHPQEAQHFARLLGRLTELRTLNHHHAEMLTSWRMSDHKFTPLLC
EIWDVQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactgggtgggcccagatgtcaatgtggtgggaccactacaggtccccaacggc
gatggcttctctctttcagagagttcccacttcttcgatatactggcggaacagggcagc
cctctactccaggacccagaagcgcttccatttacctcctatcccagcatgcagtacccc
tccatggagccccccatggcatccccttcgtactaccccagtcagcactactacccgcca
tacagtgcggaggactggtactcctcgcccagcctgtatgaactgaggaaggggcctctg
ggggcggccagctttgaggctgagatggaggaaacctccgtgttcgtaccgacagtgtgc
aagagggcccgacacacgtcccaacctggcagggtcaaaggggaggagctgtgtgtggtg
tgcggagacaaggcctctgggtatcactacaatgcacttacctgtgagggctgcaaaggc
ttcttcaggagaagcatcacaaagaacgctgtgtacaagtgcaagagcggggggacttgt
gaaatggacatgtacatgcgcaggaagtgtcaagaatgccgactcaggaagtgtaaagag
atgggaatgctggcagagtgtttgctaacagaaatccagtgtaagtccaaaaggctcaga
aaaaacacaaagggctcatcggaggagtccacagcaggtgacccagagggacccgactgt
ggcgacaccaaacaggtcacctccaccaccagactcttaaaggaaaaagtggaactcagt
caagaacaacaggctctgctcaattacattgttgacgcttacaataaacatcggattcct
ccagaccaagctaagaaactgctccaggagcagttcaacgcagaggagaatttccagtta
ctcacagaaatggctacaagtcacgtccaagtgctggtggagttcaccaaaaacatccca
ggttttcagagcttggaccacgaggaccagatcgctctcctgaaaggctcggcggtggag
gccatgtttctgcgctcagcccaggtcttcacacgcaagctccctcagggacacacagag
gtgctggaggacaggatccgcaagagtgggatctctgaggaatttatcacgcccatgttc
aacttctataagagtatcggggagctgcaaatgcttcaggaggagcatgctctcctcacc
gcaatcactattctcacaccagaccggccctatgtaagggatcagcaggcggtggagggg
ctgcaggagaccatgctggaggtgctgaggaagttctgcaagctgcagcacccgcaggaa
gcccagcacttcgcccggctactgggccgcctaacggagctgcgcaccctcaaccaccac
cacgccgagatgctcacctcctggcgcatgagcgaccacaagttcacgccgctgctctgc
gagatctgggacgtgcagtga
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