Clupea harengus (Atlantic herring): 105898281
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Entry
105898281 CDS
T09045
Symbol
scly
Name
(RefSeq) selenocysteine lyase
KO
K01763
selenocysteine lyase [EC:
4.4.1.16
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00450
Selenocompound metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
105898281 (scly)
Enzymes [BR:
char01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
105898281 (scly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
105898281
NCBI-ProteinID:
XP_012680758
Ensembl:
ENSCHAG00000020917
UniProt:
A0A6P3VTD9
LinkDB
All DBs
Position
10
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AA seq
443 aa
AA seq
DB search
MCEKQAHSFLPEYSQWGHSFSHLSEVDEERIYMDYNATTPMDSEVAEAVTVAIREAWANP
SSSYLPGVKARDIINQARESVSRMVGGKPEDIIFTSGGTEANNLVLHTAVKHFWQSRETE
EREGLNSSQQNGRAILPHLVISNVEHDSIRLTAEHLQKEGRAGVTSVAVSKVTGRVEVED
VVAAIRPTTCLVSVMTANNETGIIMPIKEICQRVRAVNKQRPLPRILVHTDAAQAIGKIR
VDACDMGVDYLTIVGHKFYGPRVGALYVNGPGTTSPLYPIFFGGGQERNFRPGTENTQMI
AGLGKAAELVNTHLSEYETHLSDIRCYLEERLLAAFGADKIRFNSHFPGSDNLPNTCNVS
ILGPRLVGRRVLATCRRLLASVGAACHSGQVDRPSRILLSCGVPYDAASNALRLSVGRST
SREDVDIVVEDLKETTEVLERMN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaagcaagctcactctttcttgcctgagtactcacaatggggtcactctttt
tcccacctctccgaagtggacgaggagaggatctatatggattacaatgccaccacccct
atggactcagaggttgcagaggcagtcactgttgcaataagggaggcttgggcaaacccc
agcagcagctaccttccaggtgtgaaggcaagggatataattaaccaggccagagagagt
gtctccagaatggttggaggaaaaccagaggatatcatcttcacatcagggggaactgag
gcgaataaccttgtgctccacacagcggtgaagcatttctggcaaagccgtgagacagag
gagagggaggggctaaacagttcccaacaaaacggcagagccatcctgcctcaccttgtc
atctctaatgtagagcacgactccatccgactgacggctgagcacctacagaaggagggc
agggcaggggtcacatctgtggcagtctccaaggtgaccggtcgggttgaggtggaagat
gtggttgctgcgatacgccccacaacctgtcttgtctccgtcatgactgccaacaatgaa
actgggattattatgccaatcaaggagatctgtcagagggtgagagctgtcaataaacag
agacctcttcccagaatcctcgtccatacagatgcagcccaggccattgggaagatcaga
gtagatgcttgtgacatgggagtggattacctgacaatagtgggacacaagttctatgga
cctcgagttggagcactctatgtgaatggacctggtaccacctctcctctctaccccatt
ttctttggtggaggccaggagcgcaacttcaggccagggactgaaaatactcaaatgatt
gctggtctaggaaaggctgcagagctggtgaacacacacctgtcagagtatgaaacacat
ctcagcgacatcagatgctacctggaggagagactattggctgcgtttggggcagataaa
atccgcttcaacagtcatttccctggttcggacaaccttccaaacacgtgcaacgtatcc
atcctgggtccaaggcttgtgggtcgccgggtgttggcgacctgcaggagattgctggct
agcgtcggagccgcgtgccactcgggccaagttgatcggccttcccgtatcctgctgagc
tgtggagtgccttatgacgcagccagcaatgcactacgtctgagtgttgggcgaagcacc
tcgcgagaggacgtggacatagtggtggaggaccttaaggagacaacagaagtgctggaa
agaatgaactag
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