Clupea harengus (Atlantic herring): 105898513
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Entry
105898513 CDS
T09045
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105898513
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105898513
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
EAD1
Motif
Other DBs
NCBI-GeneID:
105898513
NCBI-ProteinID:
XP_031425835
Ensembl:
ENSCHAG00000007576
UniProt:
A0A6P8FQV9
LinkDB
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Position
1:18921695..18941885
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AA seq
1258 aa
AA seq
DB search
MKEAEKGNDAGGGGKDGTRKSEKDQSWVPKIIKKRVCTAFVEDSFSNGALCQCGGAREMH
SSIATGDYFGAAIVSQWASVQHSSEYPTDAFGELEFAGAGRRHSNFLRLSCDTAPQIVYD
LMTAHWGVPAPNLVVSVVGGEGKEVPKPWVREVLRQGLVRAAQSTGAWIFAGGLREGVGR
CIGEAVRDHGTAASSVSQNKVIAVGVAPWGLVHNRQQLVNPQGRFPARYYVQNTSRDSRC
LDNNYQAFLLVDDGSVGRRGGEMGFRANLEDYISHQRTGIWGSGSIEIPVLCMLISGDVS
MLERVDLSLRKATPWLVLKGSGPAADLICELLDELSAMPKSPTSPPADGEGVDGPNMEQR
ERVRDRISKAFPGEADLEKLVDRALSIYQNRDLITVFHGEQEGAEDFDTVLLKALVRACK
RVSSDASENIEELKLAVAWNRVDIAKSEFFNGDIEWRYEDLENSMTDALVNDKPQFVRLF
TENGLNILDYLTNQRLESLYSSLSDSSLVYTLLQRKLSERQGVASNLAPVPAPDPSTPLK
SPISSITDPCLANELSLYEVSRVLWDILGDVCQPFYFGPLRLDHGASTRKAMKQVNKLLL
GECSYKDQRCLSPWASLFIWAVLQNRSEMAIFFWEMAGESVLSALSGCKILRELSKMENE
TESKLAMKELAQRFENLAHDVFSECYRNSESRSFSLLIRKSPLWAGTTCLQMAIAADARL
FFSHDGVQALLSQIWWGDMESCTKVWKLVISFFFPPLIYSNLISFREQEEDQKIEELFHR
RDSLDADDATVYSLADILHTKEDAEEYNALRDKSKGASLSSQKRPFVFHRWRQFWFSPVT
SFLGNVLMYFLFLFLFAYILLVDFKPPPKGPTSMELVLYFWVFTLVCEEIRQSFYVGTTA
VFQKTRLYIQDIWNKCDLTAILLFSLGLICRMFPWSYKFGRSMMCLTYMVFTMRLIHIFA
VHKQMGPKIIIVGKMVKDLFFFLFFLGVWLMAYGVANQALIYSYDSRPGWIFRRVFYRPY
MHIYGQIPLDEIDADKRSEIECTSNATLIQEGMEACPQSDANWLVLILLSVYLLVTNILL
VNLLIAMFSYTFNKVQEHSDVHWKFQRYNLIVEYHSRPCLAPPFIILSHLHLFIKRNIRK
VPSVKITHFVLEIRGRKASRLNTWESTQKENLLSIQNKKQRESDTERIKRTSSKVDSVLK
QMVEIRDHDRRLRNLESELEYCSSILSWMADSLSKSNLIKPPRPPPTRRDSVISSPSC
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagcggagaagggcaatgatgcaggtggaggaggtaaagatggaaccagaaaa
tcagaaaaggatcagagctgggttccaaagatcattaagaagagggtgtgcacagcattt
gtggaagactccttcagcaatggggctctttgtcagtgtggaggggcgcgagagatgcat
agctccatcgccacaggggattattttggggctgccatcgtgagccagtgggccagcgtc
cagcattcctctgaataccccacagatgcttttggggagctggagttcgctggggctggc
agaagacacagtaatttcctgcgcctgtcgtgtgacacagcccctcagattgtctacgac
ctgatgacggcccactggggggttccagcccccaacctggtggtgtctgtagtggggggc
gagggcaaggaggtgcccaagccctgggtgagggaagtcctccggcagggcctggtgcgg
gctgcacaaagcacaggagcgtggatatttgctgggggccttagggaaggcgttgggcgt
tgtattggggaggcagtgagggatcatgggacagcagcctcctctgtatcccagaacaag
gtcattgctgtgggtgtggcaccttggggtcttgtgcacaaccgccagcagcttgtcaat
ccacagggacgtttccctgcacgatattatgttcagaatacttctcgagattcccgatgt
ctggataataactaccaggccttcctcctggtggatgatggtagtgtaggccgcagagga
ggggagatggggttcagagctaacttagaggactacatatcccatcagcgcactggcatc
tggggcagtggcagtattgagattccagtcttgtgcatgttaatatccggagacgtctcc
atgctagagagggtggatctgtccctgcgtaaggccacaccgtggctggttctgaagggt
tctggccctgcagccgacctgatctgtgagctcctggatgagctgtcagcgatgcccaag
agccccacctcaccccctgcagacggggagggcgtagatggccccaacatggagcaaagg
gagcgggtgcgggaccggatcagcaaggccttccctggcgaggctgacctggagaaacta
gtggaccgggctctcagcatttaccagaacagggacctgatcactgtgttccacggggaa
caggaaggggcagaagactttgacacagtcttactgaaggccttggtcagagcctgcaag
cgcgtgtccagtgacgccagtgagaacattgaggagctgaagttggccgtagcctggaac
agagtggacatcgccaagagcgagttcttcaatggggacatcgagtggcggtacgaagac
ttggagaactccatgacggacgcgctggtgaacgacaagcctcagtttgtgcgtcttttc
acggagaatggcctgaacatcctggactacctgaccaaccagcgcctggagagcctgtac
agctcgctgtcggacagctcgctggtctacaccctgctgcagcgtaagctcagtgagcga
cagggggtagcctccaacctcgcccctgtgccagcccctgatcccagcacccccctcaag
agcccgatcagctccatcaccgacccctgcttagctaacgagctcagcctctatgaggta
tcccgagtattgtgggacatactgggagacgtttgtcagcccttctattttggtccactg
cgtttggatcatggtgctagcacaagaaaagcaatgaagcaagtgaataagctgttgctg
ggggagtgttcatacaaagaccagcgctgtctctctccctgggcatccctctttatctgg
gccgtcctgcagaaccgcagtgaaatggccatcttcttctgggagatggcaggagagtct
gtccttagtgctctcagtggttgtaagatactgagagagttgtctaagatggagaatgag
accgagtcaaagttggccatgaaggagctcgcccagcgctttgagaacctggcacacgat
gtgtttagtgagtgctataggaacagtgagagtcgctccttctcgctgctcatcaggaag
tctccgctgtgggccgggaccacgtgtctgcagatggccattgcagctgatgcccgactc
ttcttcagccatgatggtgttcaggcattgctctctcagatctggtggggtgacatggag
agctgcacgaaggtgtggaaactcgtcatctctttctttttcccccctctcatctactcc
aacctcatcagcttcagagaacaggaggaagatcagaagatagaggagctctttcaccgc
cgggacagcctggacgcagacgacgccacagtgtattccctcgccgacatcctgcacacg
aaagaagatgcagaagaatataatgctttaagggacaaatctaaaggagcctccctctcc
agccaaaagcgaccatttgtgttccacagatggcggcaattctggttctcacccgttacc
tcgtttcttggcaatgtgctgatgtacttcctcttcctcttcctcttcgcctacatccta
ttggttgacttcaagccaccacctaaaggccctacctccatggagcttgtgttgtacttt
tgggtgttcaccttggtttgtgaggagatacgacagtctttctatgtaggaaccaccgct
gtattccaaaagacgcggttgtacatccaggacatctggaacaaatgtgacttaaccgcc
atccttctgttctctttgggcctcatatgcagaatgttcccatggtcgtataagtttggg
cgttcaatgatgtgcctgacctatatggtcttcaccatgagactcatccacatttttgcc
gttcataaacagatgggccccaagatcatcattgttgggaaaatggtgaaggatttgttc
ttcttcctgtttttcctcggggtgtggctgatggcctatggagtagccaatcaagcactt
atatactcttatgattcccgtcctggttggatatttcgtcgagttttctacagaccatac
atgcatatttatggacagataccactggatgaaatagatgctgacaaacgcagcgagata
gagtgcacaagcaatgcaactctaattcaggagggcatggaggcgtgtccgcagtctgat
gccaactggctggtgctcatcctgctgtctgtctacttgctggtcaccaacatcctactg
gtcaatctgctcattgcaatgttcagctacaccttcaacaaagttcaggagcacagcgac
gtccactggaaattccagcggtacaacctgattgttgagtaccactcgcggccctgcctg
gctccgcccttcatcatcctctcccatctgcacctcttcatcaagaggaacatccgcaag
gtgccctctgtcaaaattacacacttcgttctggagatcaggggcaggaaggctagccgg
ctcaacacgtgggagtccactcagaaagagaatcttctgtccatccagaacaagaagcag
cgtgagagcgacacagaaagaatcaaacgcacatccagcaaggtggatagcgtactgaag
caaatggtggagatccgagaccacgaccgcaggctgagaaacctggagtcagagctggag
tactgctccagcatcctctcttggatggcggattcactgtccaagagtaacctgataaaa
ccaccacgccctccccccacacgaagagattcagtcatcagttctcccagctgctga
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