Clupea harengus (Atlantic herring): 105898520
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Entry
105898520 CDS
T09045
Symbol
ripk1l
Name
(RefSeq) receptor-interacting serine/threonine-protein kinase 1
KO
K02861
receptor-interacting serine/threonine-protein kinase 1 [EC:
2.7.11.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04210
Apoptosis
char04217
Necroptosis
char04620
Toll-like receptor signaling pathway
char04621
NOD-like receptor signaling pathway
char04622
RIG-I-like receptor signaling pathway
char04623
Cytosolic DNA-sensing pathway
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105898520 (ripk1l)
04217 Necroptosis
105898520 (ripk1l)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105898520 (ripk1l)
04621 NOD-like receptor signaling pathway
105898520 (ripk1l)
04622 RIG-I-like receptor signaling pathway
105898520 (ripk1l)
04623 Cytosolic DNA-sensing pathway
105898520 (ripk1l)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105898520 (ripk1l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105898520 (ripk1l)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105898520 (ripk1l)
Protein kinases [BR:
char01001
]
Serine/threonine kinases: TKL group
RIPK family [OT]
105898520 (ripk1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Death
RHIM
Sp-CxC
Motif
Other DBs
NCBI-GeneID:
105898520
NCBI-ProteinID:
XP_012681014
Ensembl:
ENSCHAG00000008506
UniProt:
A0A6P8F7C1
LinkDB
All DBs
Position
25:complement(12083143..12094484)
Genome browser
AA seq
684 aa
AA seq
DB search
MAMALNVDINMKSSDLIKKEPLDYGGFGEVYLCYHKTLGQVVMKTVYTGPQRNEVHRQSL
LDEGSLKKTLIHERVVKLLGVILEDGDYSLVMELIPKGNLLNMLEEVSVPLSIKGRIIAE
ILEGMVYLTENHVIHKELKPENILVDDGLHIKIADLGLATCQMWSRLTKEESRRKSHAGR
IGCPRGAATLYYLAPEHLESIHERFTEKSDIYSFAIVVWVILADKEPYENARSEDQICQC
VRKGDRPDDESIPEDTPQDILSLMKQCWNQDPLQRPTFKEAYEKFLPFYKECLQNDVESD
SQKLKGLYTGPKELVEKMKYLRMGHPGLTTPDKRAMATDSPASLRSSEMSPVEASIEDLH
FCVASEPSLQVDATPASGLEQKLAQELDYHKHGSYSYSHNDQPDSAHFQPPLHTPPYMHT
PPYLHTPPYLQHPPPLLPANGRWPLEVPCQESSVQSWAKPDTVPQSPEDKPTAHSIAGGV
PDVRCQSQTSGGPYSHQHPGVQRLMSWPNYPVPESARPDLMSASMRINSFGPGPSQEPAI
QIIGGRAIQIGHNNTMSVLSPDPDSMKSQSNEACTNTMHKELLQKYYDHAVTEDHLELLR
ENIAGNWKRCARRLGLTDVEVDTIDHDYSRDGLSEKVHQMLERWRMKEGCVGCTVGRLYR
ALKECVKVDLLLNLLLTCQESTSP
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctatggcgctgaatgtagatataaatatgaagtcatccgacctcatcaagaaagag
ccactggactacgggggcttcggggaggtctatctctgttatcacaaaacacttggccaa
gttgtcatgaaaactgtgtacactggtccacagcgaaatgaagttcaccgtcagtctctg
ctggatgagggcagtctgaagaagacactaatccatgagcgggtggtgaagttgctggga
gtgattctggaggatggggactactctctggtcatggaactcatccccaagggcaaccta
ctgaacatgctggaggaggtgtctgttccactgtccatcaaaggaagaatcattgcggag
atacttgaaggcatggtttacttaaccgagaaccatgtaattcacaaagaattgaaaccg
gagaacatactggtggatgatggcctccatatcaagattgcagacctgggattagccact
tgtcagatgtggagcaggctgaccaaggaggagtctcgcaggaagagccatgcaggtcgt
atcggctgcccacgaggggctgccaccctctactacctggcccctgagcacctagagagt
atccacgaacgtttcacggagaagtcggacatctacagcttcgccattgtcgtctgggta
atcctggctgacaaggagccatatgagaatgctaggtctgaggaccaaatctgccagtgt
gtgcgcaaaggcgaccggccagacgatgaaagcattccagaagacacaccacaagatatc
ctctcgctgatgaagcagtgctggaaccaggatcctctacagcgcccgaccttcaaagag
gcgtatgagaagttcctccccttctacaaagagtgtttacagaatgacgtggagagtgac
tcccagaaactcaagggcttgtatacaggcccaaaggaattggtggagaagatgaaatat
ctcagaatggggcaccccggcctgacaacacctgataaacgagccatggccaccgacagc
cccgcgtctctccggagctccgagatgtctcccgtggaggccagcatcgaggacctgcac
ttctgtgtggcctctgagcccagcctgcaggtggacgcgacccccgccagtggcctggag
cagaagctggcccaggagctggactaccacaagcacggcagctacagctacagccataac
gaccagcccgacagtgcccacttccagccgcccctgcacacccccccctacatgcacacc
cccccttacctgcacacccccccttacctgcagcacccgccaccactgctgcccgccaac
ggtcgctggcccctagaggtgccttgccaggagtcctctgtgcagtcctgggccaaaccc
gacaccgtcccacaaagcccggaagacaaacccacagcccactctattgctggaggagtg
ccggacgtgagatgccagagccagacgtcaggaggtccgtattctcatcagcaccctggg
gttcagcggctcatgtcctggcccaactacccagtgccggagtcagccaggccagatttg
atgtctgccagcatgcgaatcaacagctttggaccaggaccttcacaagaaccagctatt
cagattattggtggccgtgccatccagattggccacaacaacacaatgagtgtcctctct
cctgaccccgactccatgaagtctcagtctaatgaagcgtgcaccaacacgatgcacaaa
gagctcctgcagaagtattatgaccacgccgtcaccgaggaccatctggaactgctccgg
gaaaacatcgccggcaactggaagcgctgcgcccggcgcctgggcctgaccgacgtggaa
gtggacaccatcgaccacgactacagccgcgacggcctgagcgagaaggtgcaccagatg
ctggagcgctggcgcatgaaggagggctgtgtgggctgcaccgtgggccggctctaccgg
gcgctcaaagaatgcgtcaaggtggacctgctgctcaacctgctgctcacctgtcaagag
agcacaagcccctag
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