Clupea harengus (Atlantic herring): 105898566
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Entry
105898566 CDS
T09045
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
char04020
Calcium signaling pathway
char04148
Efferocytosis
char04370
VEGF signaling pathway
char04371
Apelin signaling pathway
Module
char_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105898566
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
105898566
04371 Apelin signaling pathway
105898566
04020 Calcium signaling pathway
105898566
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105898566
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
105898566
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GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Motif
Other DBs
NCBI-GeneID:
105898566
NCBI-ProteinID:
XP_031425149
UniProt:
A0A6P8FH45
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Position
1:complement(23244712..23255142)
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AA seq
501 aa
AA seq
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LSPSVYISFLTCTHCVYLGLCLSPLSLTLHLVSPSPFLCLSLSLSLSLSLSLSPIAVSLS
GVEYSEVRRPCRIMVLLNPNSGRGQALSLFSTHVQRMLTEADAVPTLVITEHQNHAQEIV
READLSQWDALVILSGDGLLFEVVNGLMEREDWEEAIQTPLGILPGGSGNALAASINRYS
GAPALLGEELLVSCGFLLCKGLVSPLDLASVHLASGQRFFSFLSLAWGFVADVDIESERY
RQVGAARFLLGTLVRLASLRVYQGRLAFLPAHEEGTVEDIVEGVAASSFTRSSSTNSSFH
STSPPDSLSSSFCSAMSCGPVANPSPTHSTFCPENSAPDDHTLNTLHNASNNAIKLLQAG
SHTTSMLKGPPDSLLPPLDEPVPTHWTQVTEQGFVLVLAMYQSFLSEDLLAAPEARSGDG
CIHLYYVLEGVSRAALLRLFLAMERGTHMACECPQLVYRQVRALRLEPLSPQGAITVDGE
QVEYGAIQAQIHGGLGKLISG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ctctccccctctgtttacatttcattcttgacctgcacccattgtgtttatcttggtctc
tgtctgtctccactgtcactcactcttcacctcgtctctccatctccctttctctgcctc
tctctctctctctctctctctctctctctctctctctcccccatcgccgtgtctctgtca
ggtgtggagtacagtgaggtgcgtcgcccctgccggatcatggtgctgctgaaccccaac
agcgggaggggccaggcgctgtccctcttctcgacccacgtccagcgcatgctcaccgag
gctgacgccgtccccacactggtcatcaccgagcaccagaaccacgcacaggagatagtg
cgagaagctgatttgtctcagtgggacgccttggtgattctgtcaggagatgggctgctt
tttgaggtagtgaacggcctgatggagagagaggactgggaggaggccatccagacccca
ctgggcatcttaccaggaggctcaggcaacgccctggctgcctccatcaaccgttactcc
ggggcccctgcgctgctgggcgaggagctgctggtcagctgtggcttcctgctgtgcaag
ggcctcgtgtctcccctggacctggcgtcggtgcacctggcctcgggccagcgcttcttc
tccttcctgtccctggcctggggctttgtggccgacgtggacatcgagagcgagcgctac
cggcaggtgggcgccgcccgtttcctgctaggcacgctggtgcggttagcctcactgcgg
gtgtaccagggcaggctggccttcctccctgcccacgaggagggaaccgtggaggatata
gtggaaggagtggcagcctcgtcattcacccgttcatcctctaccaactcctcctttcat
tctacctctccacctgactccctcagctcctcattctgctcagccatgtcatgtgggccg
gtagcaaacccctccccaacccacagcaccttttgccctgaaaactctgctccggatgac
cacacattgaacactctccataatgcctccaacaatgccatcaagctcctccaggctggc
tcgcacaccacctccatgctcaagggtcccccggactccctcctgccccctctggatgag
ccagtgcccacacactggacccaggtcacggagcagggcttcgtactggtgctggccatg
taccagtccttcctgtccgaggacctgctggctgccccggaggccaggagcggggacggc
tgcatccacctctactatgtgctggagggggtctcccgcgccgctctgctgcgcctcttc
ctggccatggagagggggacgcacatggcctgcgagtgtccccagctggtgtaccgtcaa
gtacgggcactgagactggagcccctctccccccagggggcgatcactgtggacggtgaa
caggtggagtatggcgccatacaggcccagatacatgggggactgggcaagctcatctca
ggctga
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