Clupea harengus (Atlantic herring): 105899151
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Entry
105899151 CDS
T09045
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X2
KO
K20894
shank-associated RH domain-interacting protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04217
Necroptosis
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
105899151 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105899151 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105899151 (sharpin)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
105899151 (sharpin)
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
Ubiquitin_2
ubiquitin
PH
Motif
Other DBs
NCBI-GeneID:
105899151
NCBI-ProteinID:
XP_012681751
UniProt:
A0A6P3VUU8
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Position
25:complement(12648523..12653691)
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AA seq
440 aa
AA seq
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MALSSGGWAQMPPPAQSSILVGALQSTCNTVLMSVRVSVCHSGLRPLCLPGAGDDTLRLQ
LSMDPSRAGEFRLALRDVCSSGRSVFLAEFDLRTVKYEIKSPRCHELRLTTPPHDCLSFN
FRSEQEAQEWATVVMSSLREAQRVANISQNSVEEVHQDVKSVEQQGLTELAPKEELCIEL
AKAIEAGDTSSAMQHATALAQQQLSLSIQPSQKNYEDEDINLAVVVEDASSSCCVTVKVM
PHMTVSSLKQQIFLEYGFHPRVQRWVIGQCLCVDIRSLASYGVARHGDTAFLYLLSARQA
RLSRQLCQQDQESALLTPSGTPTPGPTTHTNVPASHDWRGYSTLPSRLSHSSTSNSGAEK
NSITDVINLEALQLGGPDLSVSNTQAGWACPSCTFINKASRPGCEICSKARPESDQQGHI
QQERARKVDQGTSGTSSKAI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagctccggcgggtgggctcagatgccgccacctgctcaatcctcaatcctg
gtgggagcactgcaatccacctgcaatacagtactcatgtcggtacgagtatcagtgtgc
cattcgggactccgaccgctctgtctaccaggagctggggatgacacacttcgtcttcaa
ctaagcatggacccaagccgggctggagagtttcgattagcccttagggatgtctgcagt
tctggtcgcagtgtgtttttagcagagtttgacctgcggacagtgaaatatgagataaag
tccccacgctgccatgaacttcggctgactacacctccacatgactgccttagtttcaat
tttcgcagtgagcaggaggcccaggaatgggccactgtggtgatgtcatcactgagggag
gcccaaagagtggcaaatatctcccagaactcagtggaggaagtacatcaggacgttaaa
tctgttgaacagcagggtttgacagaattagcacccaaagaggagctgtgtatagagtta
gccaaagccatagaggcaggagataccagttctgccatgcagcacgccaccgctctggcc
cagcagcagttgtctctcagtatccagccctcacagaagaactatgaggatgaagatatc
aatcttgctgtggtagtggaggatgcctcgtcttcctgttgtgtcacagttaaagtgatg
ccccacatgacggtctcctcgctcaaacagcagatttttctggagtatggctttcaccca
cgggtgcagcgctgggtcataggtcagtgcttgtgtgtggacatacgctcgctggcatct
tatggggtggcgcggcacggcgacacggccttcctgtacctgctgtctgcccgccaggcc
cgcctgagccgccagctgtgccagcaggaccaggagagtgccctcctcacgcccagcggc
acccccactccgggccccaccacacacaccaatgtgcctgcttctcatgactggaggggc
tatagcaccctgccatccaggcttagccacagcagcacaagcaacagtggagctgagaag
aacagcatcacagacgtgataaatctggaggcgctgcagctcggtgggcccgacctcagt
gtcagcaacactcaggcaggctgggcgtgtccgtcctgcacgttcatcaacaaggcgagt
cgccccggctgtgagatctgtagcaaggcgcgaccagagtcggaccagcagggccacatc
caacaggagagagcaagaaaagtcgatcaagggaccagtgggacctctagcaaagccatc
tga
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