Clupea harengus (Atlantic herring): 105899310 Help Entry 105899310         CDS       T09045                                  Symbol dspa Name (RefSeq) desmoplakin isoform X1   KO K10381   desmoplakin Organism char  Clupea harengus (Atlantic herring) Pathway char04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:char00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     105899310 (dspa)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:char04812]     105899310 (dspa)    04147 Exosome [BR:char04147]     105899310 (dspa) Cytoskeleton proteins [BR:char04812]  Eukaryotic cytoskeleton proteins   Intermediate filaments    Intermediate filament-binding proteins     105899310 (dspa) Exosome [BR:char04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    105899310 (dspa) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Plectin Spectrin_2 Spectrin_3 SH3_10 SR_plectin_7 Spectrin Motif Other DBs NCBI-GeneID:  105899310 NCBI-ProteinID:  XP_012681934 Ensembl:  ENSCHAG00000003527 UniProt:  A0A6P3VV18 LinkDB All DBs Position 25:11786017..11804330 Genome browser AA seq 2689 aa AA seqDB search MSAYGGSNPRINTLGRRINSRTDLSGGYNFVGGNGHQTEYVEYHTSKNSLAGGGGGGGGQ GGAYQLQRKAQYLHSQCVEALERANNIFQTEGSSPEANRLMAMANECIDQLRAIAMELQS MGQPNENVRMSIFAVQKMMSEIQNYSGTTQRKNRGSIGWDEPSKNFNDAIGWINQQKRLI EKAPFGDDAEAIEQQMSKHNKYHSSLQHSMEVDRARSELTSKGDKSSLHALDQEWETLQK MSHSRTTHLRDLQGIIQEISRAIMWVNEHEEEELVFDWGNKNIDVYIPNKQESYSRLMSE LEVKEKDLNKLKHKVDILLKNNHPASDKIEAYMDTLQTQWSWLLQITKCLHVHLKENAAY SQFFKEAGETYVKLQKEHDSIRKRFSCDRSTPLETLNDLLRHLEKEKERLSEHKRQVHTL VNKSKGIIRLKPRNPEEKSNSPVIVEALCDFKQDQKGILKGNEAIMKDNSQRSKWLVTGP GGLEMMIPSVCLIVPPPNPLSIDVANKNEQYYEAISNIWSQLYINIKSLISWQYCVKDIN HINSLTLTVLSKMRPEEYRSIIKRLETHYQEFLRNSHGSEMFGDKDKREIESKYSDAQTH YDKLVVQNASQNTSQVKKEVVTVVETPAPRPVVSVLSVSLLSELNTLRRRLEAAEQGLTR QLHVPLKENSVQDCSQRLLLLQGVHHDLDGIRDEYLKLRERILHQLQGADPEQAKYLRCE LDIINQKLGSLQGFSTAYLQRLTALRALFQSLVQGEDIIKVHEARLTEKDTSSLDLNENE EYCATLKEMKSELDQKKEVLNAMESELGKAIHWNGQIDHSFHQCDVDLSKYSDLVGQMTD RWRRIQAQIDSRMWDLDKQEKQLKHYQQTSDQLTQWTEDARQRLDTLQAAKFRDVPALMD HLSQHKVLHGEIKGKKEKVENVQKDADTCASSIKDYEMQLASYSAGLETLLNIPIKRTML HSPTVIIREEAADLQSRYIELLTRSVDYHKYLGELLKNMEELKMRNTKIDFLEEELKRLK DDLQDKAQTNQSLQDSLSRFHIELNQSKEQLITVEEVKRDVTRQCNATKESLDSTSLQVR ELNDQLTRLTYQIDEEKRKRRLAEERYTSQQEEYEVTIRKRQKELEELNWAKIDFEKAVK DKEREIERLKRQLEEESAQRKAAESETSKVRTQCNQEISTVKKTYESEIHVTKTNILKTT QQKEEDISGLRLRCDKLSGEKRDLEEELRRLQLSLSQMEEARRKAEGEAHQQRSTGTEEG RRRRELEIQIQTMVQTRTSDEQRYKDSLAQALKDVQEKNHQITLLEQNLEEETRRRKALE TEGHTLKQTQVQLQSRNISSLETIKKLEISDQELCLIRVQLEKQKSEKDQLGKYVTQMQI RITDLQAVVDQLENELESEKKSKQDEFTNRKRVETELQRVNMSCKEYTTTINSLKVRLEE DSASERRAGQDLRALQEALDKSLRENKAATDKLNTLTAELKALQQQLLQEQAKVREANQR NETLYKTIEEKSRVLNDNTMEIEKLQSLTQKLTKERLRLEEELRSVRQERDDLKQSKNAS ESERTSQISALQLQLQNSTKMSLEHQALINELTKEREALKVEMSKIQNQAMETSMLIHES QTHYNEVRQERDSLLAKLKMLEQDKGKLQKLENELNRIKVSMESELRLKQRLQDELDKMT KDFNYWKSQYEIKERQVTECSTGKDKAERDRSSLLSDVERLKLELRSLEDRYKGKLQCSE REIVELTQRREALEREIRKLQQRPDASCKQTQTDEKAKTVDPSKLVFDGVRRMVSAHQLC DCGIIDKATLDKLLKGQKTVSEVSVDIQLSLKGTGVIAGMVQGSQGRMPFTEARGRNLLS NESAIMLLEAQAATGHILDPKFNEKMSVDAACSRGVVDTEDRDVLITAEAASTGFKDPFS GKLLSVGQAYKKGHVDKETTLRLLQAQESVGGILDPVLSVYLPKDAALDRNLIDEELYRA LNKKPPCYLDPDTQQKVTYTDLKKKCRMEPATGILLLPATDKPLTVKGLRGEVSVSDLVD AQLLDKSDVTKLNQGTLTSKDIEDKLKSYLHGSDCIAGIYDEANDRVMAFYQAMKEGLLR RGTTLELLEAQAASGFMIDPVQNVSLTVDEAYKRGLVGKEYKDKLLSAERAVTGYKDPHS GKTISLFQAIEKDLIEKGHGIRLLEAQIASGGIIDPLHSHRIDVDVAYKRGYFNQEMSEI LSYEGDDTKGFFDPNSHENLTYLQLKERCIKDPKTGLLLLPLKDKKKQKQQQSTQKNTLR KRRVVIVDPDTGKEMTVREAYHRELIDYETFLELSEQECEWEEITITASDGSIRLVVVDR KTGMQYDVQEVLNKGIIDQATLDRYHSGEMTLTQLADLITKDTKSSELAIVSSSADDVVT CSDPTHLGPSSPTIRKRFASVSITLSPPAEMLDDQSPVAAIFDTETLEKVTIPEAKRRGI IDTITAQRLLEAQVCTGGIINPSTGQRLLLQDAVHQGIIDEDMASKLKPAQKAYVGFEDV KTKRKMSAAEAMKEKWLPYEAGQRFMEFQYLTGGLLEPATGQRVSIEEAIRRGWLDGRNA QKLQDTKSYLKMLTCPKTKLKISYKEAMDKCMVEENMGMKMLQASSMSTKGISSPYNVSS GPSSRSGSRAGSRTSSRAGSRRGSVDYSSAFNYSSFTTSSQTFSSGSQT NT seq 8070 nt NT seq  +upstreamnt  +downstreamnt atgagtgcttacggcgggtccaatcccagaattaatactctcggacggagaattaattca agaacagatctttccggaggttataacttcgttggtggaaatggacatcaaaccgagtat gtggaataccatacttcgaaaaactccttggctggtggtggtggaggaggtggaggacaa ggaggagcatatcaattgcaaaggaaggctcagtatctacattcacagtgtgtagaggcc ttggagagagctaataacatctttcaaactgaggggtcatcaccggaggcgaacagatta atggccatggccaatgaatgtatcgatcaactcagggccatagccatggagctgcaatct atgggtcagcccaatgagaatgtccgaatgagtatttttgcagtccagaagatgatgtca gagatccaaaattacagtggaaccactcagaggaagaaccgtggaagcattggctgggat gaacctagcaagaacttcaatgatgccataggatggatcaaccagcagaagcggctgatt gagaaggctccattcggtgatgacgcagaagctattgagcagcagatgtcgaagcataac aagtaccacagctccctgcaacacagcatggaggtggacagagcgcgcagcgagctgact tcaaagggagataaatcttccctgcatgccctggaccaggaatgggagactttacagaaa atgtcacacagccgcacaactcatctgagggatcttcagggcatcattcaggagatctcc agagccatcatgtgggtgaacgagcacgaggaggaagagctggtgttcgactggggtaac aagaacatcgacgtctacattcccaacaaacaggaaagctactctagacttatgagtgaa cttgaggtgaaagagaaggatttgaacaaactaaagcacaaagtggacatcctactgaaa aacaaccatccggcctctgataagatagaggcttacatggacaccctgcagacccagtgg agctggctcctgcaaatcaccaagtgtctccatgtccacctgaaggagaatgctgcctac agccagttcttcaaggaggccggcgagacctacgtcaagctgcagaaggagcacgactcc atccgaaaaagattctcctgcgacagatccactcccctggagacgctcaacgatctgctg cgccacctggagaaagaaaaagagcggctctcggagcataagaggcaagtccatacactg gtcaacaagtcaaagggcatcatccgcctgaagcctcgcaacccagaggagaagagcaac agcccagtgatagtggaggctctgtgtgacttcaaacaggaccagaagggcatcctcaag ggaaacgaggccatcatgaaggataactcgcagcgcagcaagtggctggtgaccggaccg gggggtctggagatgatgattccctctgtgtgcctcatcgttccacccccgaacccgctc agcatcgacgtggccaacaaaaatgagcagtactacgaggccatctcgaacatctggagc cagctgtacattaatatcaagagtctcatatcctggcagtactgcgtgaaagatataaat cacatcaactccctcaccctcactgtgttgtcaaaaatgcgaccagaggagtaccgcagt atcataaagcgtctggagacccactaccaggagttcctgcgcaacagtcacggctctgag atgtttggcgacaaggacaagcgcgagatagagtcgaagtacagtgatgcccagactcac tacgacaaactggtggtccagaacgcttcccaaaacacctcccaggtgaagaaggaggtg gtgacagtggtggagacacccgcgccacggccagtggtctcggtgctgagcgtgagcctg ctctcggagctgaacacgctgcgtcggcgtctggaggcggcagagcagggcctcacccgc cagctgcacgtgcccctgaaggagaacagcgtccaggactgctcccagcgcctgctcctc ctccagggtgttcaccatgatttggacggcatccgtgatgaatacctgaaactccgggag agaattctgcaccagctgcaaggggctgaccccgagcaggccaagtacctgcgctgtgag ctggacatcatcaaccagaaactgggcagtctgcagggcttctccacggcatacctacaa aggctgactgccctgagggccttgttccaaagcctggtccagggtgaggatatcatcaag gtgcacgaagcccgtctgactgagaaagacacgtcctccctggacctgaatgaaaatgag gagtactgcgccacccttaaggaaatgaagtctgaattggaccagaagaaggaagtgttg aatgctatggagtccgagcttggaaaggcaattcactggaatgggcagattgaccactcc ttccaccagtgtgatgtagatctgtccaagtactcagatctagtaggacagatgacggac cgctggcgtcgcatccaggcacagattgatagccgtatgtgggacctggataaacaggag aagcagctgaagcactaccagcagaccagtgaccagctcacccagtggactgaggacgcg cgccagcgcctggataccctgcaggccgccaagttcagagatgtgccggccctcatggac cacctcagccagcacaaggtgctgcacggtgaaatcaagggaaaaaaggagaaggttgaa aatgtccagaaagacgcagacacgtgtgcctcctccatcaaggattatgaaatgcagctg gcctcttatagtgctggactggagacactccttaacatccccatcaagagaaccatgctg cactctccaactgtgatcatcagagaagaggcagcagatctgcagtctcgctacattgaa ctcctgacacgctcggttgactaccacaagtaccttggagaactgctgaaaaacatggag gaacttaagatgagaaacactaaaattgacttcttggaagaggaactgaaacgcctaaag gatgaccttcaagacaaagcccaaacaaatcaatccctacaggacagtctctcccgcttt cacatagagctcaaccagtccaaagaacagctcatcaccgtagaggaagtgaagagagat gttacccggcagtgcaacgctaccaaggagagtctcgacagcacctccctgcaagtgagg gagctgaacgatcagcttactcgcctcacctaccagattgatgaggagaaacgcaagagg aggctagccgaggagcgctacaccagccagcaggaggagtatgaggtcaccatccgaaaa aggcagaaggagctggaagagctcaactgggccaagatcgactttgagaaagcggtgaag gacaaggagcgtgagatcgagcggctgaagaggcagctggaagaggagtctgcgcagagg aaggcggccgagtctgagacctcaaaggtaagaacccagtgcaaccaggagataagtacc gttaagaaaacatatgaaagcgagatccatgtcaccaagaccaacatcctcaagaccacc cagcagaaggaggaggatatcagtggactcagactgagatgcgacaagctgtctggggag aagagagacttggaggaagagctcaggagactacagttgtctctgagccagatggaagag gccagacgaaaagctgagggcgaagcccaccagcagaggtccactggcacagaggagggg agaaggaggagggagctggaaatacagatccaaactatggtgcagacgaggacatcggac gaacaaagatacaaggattccctggcgcaggccttgaaggatgttcaggagaagaaccat caaatcacgttgctcgaacaaaaccttgaggaagagaccagaaggcgtaaagcattggag actgaaggccacacgctgaagcaaactcaggtgcagctgcagagcaggaacatctcatca ctggagaccatcaagaagctagagatctccgaccaagagctgtgcctgatccgagtgcag ctggagaagcagaagagtgagaaggaccagttgggcaaatatgtcacccagatgcagata cgcatcacagacctccaggcagtggtggaccagctggagaacgagctggagagtgagaag aagagtaaacaggacgagttcaccaacaggaagcgtgtggagactgaactccagagagtg aatatgtcctgcaaagaatacaccaccaccatcaacagcctcaaagtgcggctggaggag gactccgcctcagagaggagggccggccaagacctccgcgcgctccaggaggctctagac aagagtctgagggagaacaaggccgccactgacaagctgaacacactgactgccgagctg aaggctctgcagcagcagctgctacaagagcaggccaaagtccgcgaggcaaaccagcgc aacgaaaccctgtacaagaccatcgaagagaaaagccgagtgctcaatgacaatactatg gagatcgagaagctccagagcctcacacagaagttaaccaaggagcgtctgaggctggag gaagagctccgctccgtacgccaggagagagatgacctgaagcagagcaagaatgccagc gaaagcgagaggacttctcaaatatcagcccttcagctgcagttgcagaacagcactaaa atgtccctggagcatcaggctctcatcaatgagctaactaaagagagagaggccttaaag gtggaaatgtccaaaatccaaaaccaggccatggagacatccatgttgatacacgagtca caaacgcattacaacgaagttcgccaggagagagatagcctgctggctaagctcaagatg ctggagcaagataaggggaagttgcagaagcttgaaaatgagctgaaccgcatcaaggtg tctatggaatctgaactacggctcaagcagcgcctgcaggatgagctggacaaaatgaca aaggacttcaactactggaagagtcagtatgagatcaaggaaagacaggtgacagagtgc tctacagggaaggacaaggcagagagagaccggagttcgcttttgagcgatgttgagagg ctgaagctggagctgaggagcctggaggaccgctacaagggcaagctgcagtgctctgag agggagattgtggagctcacccagagaagagaggctttggagagggagatcagaaagcta cagcagcgcccggacgcctcctgcaagcaaacgcagacggacgagaaggccaagacagtg gacccatccaagctggtgtttgacggtgtgcggcgcatggtcagcgcgcatcagctgtgc gattgcggaatcattgacaaggccacactggacaagctgctgaaaggccagaagaccgtg tctgaggtcagtgtcgacattcagctcagcctcaagggcacaggtgtcatcgccggcatg gtgcaaggctcccagggcagaatgccttttactgaagccaggggcagaaatttgctgagt aatgaaagtgctattatgcttctggaagcccaggcagcaacaggccacattttggatccc aagttcaatgagaaaatgtcggtagatgctgcatgttccagaggtgtggtagacacagag gacagagatgtgttgatcacagctgaggcagctagcacagggttcaaagatcccttctct ggaaaactcctttccgttggtcaggcttacaagaaagggcacgttgacaaggagacaacc ttgcgtcttcttcaagcacaggaatcagttggtggcatcctggacccagtgctgagtgtt tacctgcccaaggacgcagcccttgaccgtaacctgattgatgaggagctttaccgggcc ctgaacaaaaaacctccctgctacttggacccagacacccagcagaaggtcacctacact gacttaaagaagaagtgcagaatggaacccgccacaggaatacttctgctccctgccaca gacaaacccctgacggtgaaaggtctccgtggagaggtctcagtcagtgatctggtagat gcccaattgctggataaaagtgatgtgactaagttaaaccaaggaaccctcacaagtaaa gatatagaggacaagctgaagtcctacttacatggctctgactgcatcgcaggaatctac gatgaggccaatgaccgagttatggccttttaccaggccatgaaagaggggctcctgaga cgaggcaccactctggagcttctggaggcccaggctgcctctggattcatgatagaccca gtccagaacgtgtctctgactgtggatgaggcctacaagagaggcctggtgggcaaggaa tacaaagacaaactgctctctgcagagagggccgtcaccggatacaaagatccacactca ggaaagaccatctcacttttccaggccattgaaaaagatcttattgagaagggccatggt atcaggctgctggaagctcagattgcaagtggcggcatcattgatcctttacatagccac cgcattgacgtggatgtagcctacaagagaggttacttcaatcaagaaatgagcgaaatc ctgagctatgaaggggatgacaccaaaggcttttttgaccctaacagtcacgagaatctg acatatctgcagctgaaggagaggtgcataaaagaccccaagactgggctcctcctcctc ccactcaaagacaagaagaagcagaagcagcagcagtccacgcagaagaacacactccgc aaaagaagggttgtgattgtggaccccgacacaggcaaagagatgacagtgcgggaggcc taccaccgagagctgatcgactatgaaaccttcctggaactatctgaacaagagtgtgaa tgggaagagatcaccattacagcatcagacggcagcatccgattggtcgtggtggaccgc aaaacaggcatgcagtacgacgtccaggaggttctgaacaagggcataattgaccaggcc acgcttgaccggtaccactcaggggagatgactcttacacagttagcagatctcatcacc aaagacaccaaaagttcagagctcgcaatagtctccagcagtgcggacgatgtagtcaca tgcagcgaccccacccatctgggtccatcctcaccaaccatccgaaagcgcttcgccagt gtctccatcaccctctcccctccagcagagatgcttgatgaccagagtcccgtggctgcc atttttgacacagaaaccttggagaaggtcaccatccccgaagcaaagcgccgtggtatc attgacactatcacagcccagaggcttctggaggctcaggtctgcaccggaggcatcatc aacccgtccactggtcagaggctcttgctgcaggatgccgttcaccagggcattatcgac gaagacatggcttctaagttaaagccagcacagaaagcctatgtcggatttgaggacgtc aagacaaaaagaaaaatgtcagctgcagaggctatgaaggagaaatggcttccatatgag gccggtcagaggttcatggagttccagtacttgacaggcggtctgctagagccggctact ggccagcgggtcagcattgaggaggccatccgtagaggatggctggacgggcgcaacgca cagaagctccaagacaccaagagctacctcaagatgctcacgtgccccaagaccaagctg aaaatctcctacaaagaagccatggataagtgcatggtcgaggagaacatgggaatgaag atgctccaggcctcttccatgtccaccaagggcataagcagcccttacaacgtgtcctct ggacccagctcccgatcaggctccagggctggttcacgcaccagctcccgtgctggttct cgaagaggcagtgtcgactactcctccgcattcaattacagcagcttcaccacctcctcc caaacattcagctctgggtcccagacataa

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