Clupea harengus (Atlantic herring): 105899726
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Entry
105899726 CDS
T09045
Name
(RefSeq) N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1-like
KO
K09657
beta-1,4-N-acetylgalactosaminyltransferase 4 [EC:
2.4.1.244
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00513
Various types of N-glycan biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
105899726
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105899726
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.244 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase
105899726
Glycosyltransferases [BR:
char01003
]
Glycan extension
Wide specificity
105899726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
PA14
Motif
Other DBs
NCBI-GeneID:
105899726
NCBI-ProteinID:
XP_031424473
Ensembl:
ENSCHAG00000005977
UniProt:
A0A6P8F7H1
LinkDB
All DBs
Position
6:complement(14668766..14723844)
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AA seq
1167 aa
AA seq
DB search
MCLRMPRFPLKKIRKQLKLLLLLVLLTFAVWFTYLHIHQGKVFRLQLSYGKDAEKQIEKG
PRKPSHMPHGQHYHGDAPDSQEEDQAEDERAYVQSRDADLHSFLNQKLLKLPWKPEHKGQ
ANLHVFEDWCGSSISKLRKNLHFPLYPHSRTTVKKLAVSPKWKNYGLRIFGFIHPYRDGD
FQFAISSDDNSELWLSSDDSPLNAHLLAYVGMRGCEWTAPGEFSKFRSQTSKVMHLRASR
RYYFEVLHKQDDRGSDHVEVAWRPFLPGLKFDIIDSAYISLYTDESSLMMDNVSHVPQTL
ASHTRQKGLSRAPGSRPHADMLTPDPRDTFYRIPLISEFRLQNVLPSCLYSPTYVLKDFP
IARYQGLQFVYLSFVYPNDFTRLTHMEKDNKCFYKESTVYLEKYGFYKYMKMDEEDDDTP
FFFPNPDDFLDEVEGADPEEETLISDNQPVRRSENHSVTNQAARVSLKPTPLNEDREGRF
YSREKSKPEKGGSERDGDKDEEREERQGRDGNENAQAVGPGGRTLSWVRARGAGVDPETA
PSRTHIQTHTHTLQNSQHLLPQNSSLYTLMKRFLGNAPWNSVPAEHTSVGSHARRGDRVG
RGYRARPQTPGSGEHSVEVMPGIFLYRAGNTARLVRSKAKHRDTDQTSAGIAHLNIPSNS
QAPSDSKTPPTTATTNLPNDPPDHPEDNPASRWSFSSMSPPGSSPSSTPPKSRPLPGPHF
SENSLPMEDGQSTKASRASEPTASQPVASDVGSQAEQDGGTSEYSYEEPEDLKPDWVEKE
INWQRTFSANTVDFETLRSDWNDLRCNVSGNLQLAEGEALHLISQYMDRLNKHNGGIYTL
QRIVNVEKRRDSARGHRFLVELVLLEGGKNVVRVSEYIYLLLRRSRLDDSLEMREGGAPS
SPTFSASPAHSVPPRSPVPSRSSVQEHATLAWGPSYTRPLLCRPSVLRWRHDVMVHFVVP
VKNQARWVVQFISDMEALRQETQDDNFSVVIVDFQSEDMDVERALRESSLPRYEYLRRAG
RFERAAGLQAGVDSIQDSHSIVFLCDLHIHFPATLLESIRKHCVEGRLAFAPIVMRLNCG
ATPQEPDGYWEVNGFGLLGLYKSDFDRVGGMNTEEFKERWGGEDWELLDRVLQNGLEVER
LRLRNFFHYFHSKRGMWNSQTKKLPKG
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttaaggatgcctcgcttccccctgaaaaaaatccgaaagcagctcaaactcctg
ttgctgctggtgctcctgacgttcgccgtgtggttcacctacttgcacatccaccagggc
aaagtcttcaggctgcagctcagctatggcaaagatgcagagaagcagattgagaagggg
ccacggaagccttcccacatgccacatggacaacattaccatggcgatgcccctgacagc
caagaggaggatcaggccgaggatgagcgtgcctatgtgcagagcagggatgccgacctc
cattcgttcctcaaccagaagctgctgaaattgccatggaaacctgagcataagggtcag
gccaatcttcatgtgtttgaggactggtgcggttcctccatctccaagctcagaaagaac
ttacatttccccctttaccctcacagtagaactacagtgaagaaattggcagtgtctcct
aaatggaaaaactacggccttcgcatctttggttttattcatccgtacagagatggggat
ttccagtttgcgatctcgtctgatgataactctgagctgtggctgagctcggatgacagt
cctcttaatgcccacctgctggcctatgtaggcatgcgtggctgcgagtggacagctcct
ggagagttcagcaagttcagatcccagacctctaaagtcatgcatcttagagcttcaagg
aggtactactttgaagttttgcacaagcaagatgacagaggttcagaccatgtggaagtt
gcgtggcgcccgtttctgcctggcttgaagtttgacatcattgactctgcctacatctcc
ttgtacacagatgagtcctctctgatgatggacaatgtgtctcacgtccctcagacactg
gccagtcacactcgacagaaagggctcagcagagctccagggtcaagacctcacgctgat
atgctgactcctgacccccgagacaccttttaccgcattccgctgatctctgaatttcgg
ctccagaatgttctgccctcctgtctctactctcccacatacgtcctcaaagacttcccc
atcgcccgctaccagggtctccagtttgtgtatttgtcatttgtttaccccaatgacttc
acccggctcacccacatggagaaagacaacaagtgtttctacaaggagtctaccgtgtac
ctggagaagtatggattctacaaatacatgaaaatggatgaagaggacgatgacactcct
ttctttttcccaaatcctgatgatttcctggatgaagtggaaggggcggacccagaggag
gagacactgatctcagacaaccagccagtcaggaggagtgagaaccatagtgtgactaat
caggctgccagggtatcgctaaagcccacccctttaaacgaggacagagagggaagattc
tactcacgagagaaatcaaagcctgagaaaggggggagcgagagagatggagataaagac
gaggagcgagaggagaggcagggcagagacggaaatgagaacgctcaggccgtcggaccc
ggaggacgtactctctcatgggtgcgagcgcggggagccggagtggaccccgaaacagca
ccttctcggacacacattcagactcacacgcacacactccagaactctcagcacctgctc
ccacagaacagctctctctacactctcatgaagcgtttccttggcaatgcgccctggaat
tctgttcctgctgaacacacttcggtcggttcacacgcgcggaggggagacagggttggt
agaggttaccgtgcgcgcccacaaacccctggaagtggggagcactcggtggaggtcatg
cctgggatcttcctctaccgcgctggaaataccgcccgactggtccgctccaaagccaag
cacagagacacagaccaaacctcagcaggcatcgcacacctaaatataccctcaaactca
caagctccttctgacagtaagacaccaccaaccacagccacaacaaacctgccaaatgac
cccccagaccacccagaggacaatccggcatccaggtggagcttcagctccatgagcccg
cctggaagctccccttcctctactcccccaaaaagcagacccctccctgggcctcatttc
tctgaaaacagcctccccatggaggacggccagtccaccaaagcctccagggcctccgag
cccactgcttcccagccagtggcctcggacgtgggctcgcaggctgagcaggatgggggc
acgtcagagtacagctacgaggaaccggaggacctgaagccagactgggtggagaaagag
atcaactggcagcggacgttcagcgccaacacggtggactttgagacgctgcgctccgac
tggaacgacctgcggtgcaacgtgtcaggaaacctgcagctggccgagggagaggctctc
cacctcatctcacagtacatggacaggctcaacaagcacaacggaggcatctacactctg
cagcgcatcgttaacgtggagaaacgccgcgactcagccagggggcaccgtttcctggtg
gagctggtgttgctggagggaggaaaaaatgtggtgcgcgtctctgaatatatttacctg
ctgctacgccgcagccgcctggacgacagcttggagatgcgggagggtggcgccccttcc
tcccccacgttctctgcctctcctgcccactctgtgcccccccggtccccagtgcccagc
cgcagcagtgtccaggagcatgccacccttgcctggggccctagctacaccaggcccttg
ctctgcaggcccagtgtcctccgctggagacatgatgtcatggtgcatttcgtggtgcca
gtaaagaaccaggctcgctgggtggtgcagttcatctccgacatggaagcactgcgccag
gagactcaagacgacaatttcagtgtggtcatcgtggacttccagagtgaggacatggat
gtggagagggccctgagggagagctcattacccaggtatgagtatctgaggcgtgcaggt
cgctttgaacgtgcagctgggctgcaggcaggtgtggacagcatccaggacagtcacagc
atagtattcctgtgtgacctgcacatccacttccctgccactctgctggagagcatcagg
aagcactgtgtagagggcaggctggccttcgcacccattgttatgagactcaactgtgga
gctacaccgcaggagccagatggctactgggaggtgaatggctttgggctgcttggtctg
tacaagtcagactttgaccgggtgggaggcatgaacacagaggagtttaaagagcgctgg
ggaggagaggactgggaactgctggatagggttctgcagaacggactggaggtggaaagg
ctccgcctgaggaactttttccactacttccactccaagcgcggaatgtggaactctcag
acaaagaagcttcctaaaggctag
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