Clupea harengus (Atlantic herring): 105899783
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Entry
105899783 CDS
T09045
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
105899783 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105899783 (mmp2)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
105899783 (mmp2)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M10
105899783 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Peptidase_M66
Metallopep
Motif
Other DBs
NCBI-GeneID:
105899783
NCBI-ProteinID:
XP_012682452
Ensembl:
ENSCHAG00000001051
UniProt:
A0A6P3VWV0
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Position
6:16819891..16833692
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AA seq
660 aa
AA seq
DB search
MGSYKFFCSRHLILKVFLIQCVVLMRTSAAPSPIIKFPGDDSPPTDKEVALHYLNKFYGC
PTDRCNLMVLKDTLKKMQKFFSLQETGEIDHKTVEIMKKPRCGVPDVANYNFFHRKPVWT
KKDISYRILGHSPDLDEETIDDAFFRAFKVWSDVTPLKFNRIMDGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFLFM
GTEYDTCTSKGRDDGFLWCSTTYDFDNDGKYGFCPHELLFTLGGNSDGTPCKFPFTFQGD
KYDGCTTQGRDDGYRWCATTEDYDRDKKYAFCPETAMSTVGGNSEGAPCVFPFVFLSNSY
DSCTTSGRSDGKMWCAVSKSFDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDTGAL
MAPVYTYTKNFVLSNDDIRGIQELYGGSTDKPDKPTSPTQGPVTPMEFCNENIIFDAVAQ
IRGETFFFKDRFLFRSATFMSKPTGPMLVATFWSDLPEKIDAAYENPLEEKTVFFAGNEI
YIYSGSTLERGYPKSLSSIGLPSDVHKVDAAFSFSKSKKTYVFAGTRFWRFNEAKKKMDP
GFPKQIADAWNGIPDNIDAAFSLNQKGSSYFFKDSYYLKIDDSSLKITKVGEVKTDWLRC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttataagtttttctgctccaggcatttgattctgaaagtctttttgatacag
tgcgttgttttaatgagaacttcagctgctccctcgcctattatcaagtttccaggagac
gacagtccaccaacggacaaagaggtggcactgcactatctgaataagttttatggatgc
ccaacagacagatgcaacctcatggtccttaaagacacgctgaagaaaatgcagaagttc
ttctctctgcaagaaaccggggagatcgaccataagacagtggagatcatgaaaaagccc
cgctgtggagtgccagatgtggccaattacaacttcttccataggaagcctgtgtggacc
aagaaggatatatcatacagaattcttgggcacagtcctgatctggatgaggagacaatc
gatgatgccttcttccgtgccttcaaagtatggagtgatgtaactccactgaaattcaac
aggatcatggacggagaggctgacatcatgatcaactttggccgcaatgagcatggtgat
ggctaccccttcgatgggaaagatggccttttggctcatgccttcgctccaggcccaggc
attgggggtgactcccactttgacgatgatgaacagtggacgctgggcgaaggccaagtg
gtgaaggtgaagtttggaaatgcggagggcgaattctgtaagttccccttcctcttcatg
gggacggagtacgacacctgcacctctaagggccgcgatgatggcttcctctggtgttca
accacatacgactttgataacgatgggaaatatggcttctgtcctcatgagttgctgttt
acattgggtgggaattccgatggaaccccctgcaagttccccttcacgtttcagggggat
aagtatgatggttgcaccacccaaggccgagatgatggctaccgttggtgtgccaccacc
gaggactacgaccgtgacaagaagtatgcgttctgtccagaaactgccatgtccacggtg
ggagggaactccgagggcgctccttgtgtgttcccattcgttttcctgagcaacagctat
gactcctgtaccacctctggacgcagtgatggcaagatgtggtgtgccgtctccaagagc
tttgatgatgaccgtaaatggggcttttgccctgaccaaggctacagcctgttcctggtg
gcggcccatgagtttggtcatgctctgggcttggagcactcgcaggacaccggagccctg
atggcccctgtctacacctacaccaagaactttgtgctctccaacgacgacatccgcggc
atccaggagctctatggcggttctacagacaaacccgacaaacccacgtcaccaactcaa
ggtccagtgacccctatggaattctgcaatgagaacattatctttgatgctgtggcccag
attcggggagagacgttcttcttcaaggacaggttcctcttcagatctgccactttcatg
tccaagcccacaggccctatgctggtggccacattctggagcgatcttcctgagaagata
gacgcagcctatgagaacccactggaggaaaagactgtgttctttgcagggaatgagatc
tacatctactcgggcagcacactggagagaggctatcccaagagcctctcttccatcggt
ctgccatccgacgtacacaaagtagatgcagccttctccttcagcaagagcaagaagacc
tatgtgtttgctggaaccaggttctggaggttcaacgaggccaagaagaagatggatcct
ggcttccccaagcagatcgcagacgcttggaacggcatcccagacaacatagacgcagcc
ttcagcctgaaccagaaaggctccagctactttttcaaggattcctactatctcaagata
gatgacagcagtttgaagattaccaaagtgggagaggtgaaaacagactggctgcgatgc
tga
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