Clupea harengus (Atlantic herring): 105899787
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Entry
105899787 CDS
T09045
Symbol
slc6a2
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105899787 (slc6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105899787 (slc6a2)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105899787 (slc6a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
DUF7942
Motif
Other DBs
NCBI-GeneID:
105899787
NCBI-ProteinID:
XP_012682457
Ensembl:
ENSCHAG00000004045
UniProt:
A0A6P8F970
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Position
6
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AA seq
626 aa
AA seq
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MNLQVMPEHKLSSVAPLKPYNVEKKEVELILVKEQNGVQYTNSSIIETPSPGGCPSAVAP
TDEERETWGKKLDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLFIAGMPLFY
MELALGQYNRQGAATVWKICPAFKGVGYTVIIIALYVGFYYNVIIAWSLYYLFASCTSQL
PWLHCNNKWNSENCTIPTLINGSVLGNGTSYSKYKLTPAAEFYERGVLHSYQSRGIHDLG
TPRWELVLCLVVVVFILYFSLWKGVKSSGKVVYVTATMPYMVLFVLLIRGITLPGAMNGI
RDYLSIDLKMLNKPSVWIDAATQIFYSLGAGFGVLIAYASYNKFDNNCYRDAILTSTVNC
VTSFFSGFAIFSVLGYMAQKHGVKIKDVATEGPGLVFIIYPEAISTLPLSTLWAIIFFIM
LLTLGIDSSMGGMEAVITGLSDDFQILKRNRKAFTFATAFGTFLVALLCITNGGIYVLTL
LDNYAAGTSILFAVLIEAIGVSWFYGVDRFSEDIERMMGFKPGLYWRLCWKFVSPAFLLF
VVIASIVTSTGLKYDDYTFPAWSNVVGWSIALSSMLFVPIYAIYKFISVPGTFKERIAYC
ITPEHEHHLVREGNVRQFKLKHWLAI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccaagttatgcctgagcacaagctctcatctgttgcccccttgaaaccttac
aatgtggaaaagaaagaagttgaactcattctggtgaaggaacagaatggggtccagtac
accaactcctccatcatcgaaaccccaagcccaggtggctgtccatctgcggtggcccct
actgatgaggaaagagaaacatggggaaagaaattagactttctcttgtcggtcattggc
tttgctgtggacttggccaacgtttggagatttccctatttgtgctacaaaaacggcgga
ggtgcctttttgatcccatatactcttttcctgtttattgccgggatgcctctcttttac
atggagctggctctaggacagtacaacagacaaggcgcagctacagtgtggaagatatgc
ccagcgttcaaaggtgttggctacacggtcatcatcattgccttgtacgtgggcttctac
tacaatgtcatcatagcctggtccctatactacctgttcgcctcctgcaccagtcaacta
ccttggctccactgcaataacaagtggaacagtgaaaactgcacaatcccaacgctcatc
aacggttctgtcctgggaaacgggaccagttattctaaatacaagctcacgccagcagct
gagttctacgagcgtggtgtccttcacagttatcagagcagaggaatccatgacctgggg
actccacgctgggagctcgtcctgtgcctggtggtggtggtcttcatcctctacttcagc
ctgtggaagggggtcaagtcctcaggaaaggtggtgtatgtcacagccactatgccctac
atggtgctgtttgtgctgctgattcgaggcatcactctaccaggggctatgaatggcata
agagactacctctccattgaccttaagatgctgaacaagccatcggtctggattgatgct
gcaactcagatattctactccctgggggcaggatttggagttctcatcgcatatgccagt
tataataaatttgacaacaactgctacagggatgccatcctgaccagtacggtgaactgc
gtcaccagctttttctcagggtttgccatcttctctgtgttgggttacatggcacagaaa
catggcgtgaagatcaaagatgtggccactgaagggccaggactggtgttcattatctac
ccagaggccatctccactctcccgttgtctacactgtgggccatcatattcttcattatg
cttttgacccttggcattgacagttcaatgggaggcatggaggccgttatcactggcctt
tcagatgactttcaaatacttaagaggaaccgcaaggcattcacttttgccacagcattt
ggaacattcctggttgccctactctgtatcaccaatggagggatctacgtgttgaccttg
ctggacaactacgctgctgggacctccattctgtttgcagtactgatcgaggccatcggc
gtctcatggttttacggcgtggacagattcagtgaggatatcgagcgcatgatgggcttc
aagccaggtctttactggaggctctgttggaagtttgtcagcccagcctttctcctgttt
gtggtcatcgcaagtatcgtcacctctactggcttaaaatacgatgactacacatttcct
gcatggtctaacgtggttggctggagtatagctttgtcatccatgctttttgtacctatc
tatgccatttataagttcatcagtgttccaggtaccttcaaagagaggatagcctactgt
attaccccggagcacgaacatcacctggtgagagaagggaatgtcaggcagtttaagctc
aaacactggctggccatttga
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