Clupea harengus (Atlantic herring): 105900246
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Entry
105900246 CDS
T09045
Symbol
sp1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04137
Mitophagy - animal
char04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105900246 (sp1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105900246 (sp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105900246 (sp1)
03029 Mitochondrial biogenesis [BR:
char03029
]
105900246 (sp1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
105900246 (sp1)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
105900246 (sp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
105900246
NCBI-ProteinID:
XP_012682966
Ensembl:
ENSCHAG00000001360
UniProt:
A0A6P3VWQ7
LinkDB
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Position
5:complement(2332160..2339983)
Genome browser
AA seq
684 aa
AA seq
DB search
MTGEQQQDEMAALVESDGGFLQKRNRNTEQDSQQPSPLALLAATCSRMDENDATSDQQNQ
QQSQQLDLSHSQITHTANGWQVISAGATSTANPNTSTSLVMAEDQKHRLVVSSAAGVHHQ
PQQQYVMANNMQGQQVLTTLSGVMPNIQYQVIPQFQTVDGQQLQLAQTQQDSSLLGGGQF
QLVSSPNGGQQLIAATNRSGAAGNILTVPGLIQQGISLQNLGLGNAMLPNQTQFLANMPV
SLNGNITLLPVSTGVPTTDAGNNQQLMQQQPTAVSSNYYTSAITTASSQPVTSYGISTQA
QSTNTVVTGTFQNATGGIPIQPDNRDGQQQQQQQQQQILIQPQQILQGAQTLQSIQQGTV
TTAGGQVFATPTISQDALQNLQIQTIPNSGPILLRTVGANGQVSWQTIQLQNPGGAQITL
APMQSIPQLAQTQTGGTVQLQGLQTINLNPLGNAGLQMHHLQGVPIAIANPAGDQSMQNA
TGNDSMDDAALEEGMETSPTPNRRTRREACTCPYCKDGEGRRDPTKKKQHICHIPGCNKV
YGKTSHLRAHLRWHTGERPFVCSWSFCGKRFTRSDELQRHKRTHTGEKKFSCPECPKRFM
RSDHLSKHIKTHLNKKGTAVAGQPTSESASPAPMASDNSAQPEAPTLITMETLSPEGIAR
LASSGINVMQVTDIHSLNMNSNGY
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgactggtgagcaacaacaagatgaaatggccgcgctggtggaaagtgacggaggcttc
cttcaaaagcgaaacagaaataccgaacaggactcccagcagccatctcccctcgctctg
ttagcagctacctgcagtcgcatggatgagaatgatgccacatctgatcagcaaaaccag
cagcaaagtcagcagctagacctcagccactctcagatcacacacactgccaacggctgg
caagtcatctcagccggtgctacgtccactgccaatcccaacaccagcacctctctggtc
atggctgaggatcagaagcacaggctggtggtgtcctcggcagcaggggtacatcaccag
ccccagcagcagtatgtaatggccaacaatatgcagggccaacaagtgcttacaaccctc
tctggtgtgatgcccaatatccagtaccaggtcataccccaattccagactgtggatggg
cagcagctgcagcttgcccaaacccagcaggactcttcattactggggggtggccagttt
cagcttgtgtcctcccccaatggtggtcagcagctcattgcagccaccaacaggtctggg
gctgcaggtaacatcctgactgttccgggcctaattcagcaaggcatatccctccagaac
ctgggcctgggcaatgccatgctgcccaaccagacacagttcctggcgaatatgccggtg
tcgctcaatggcaatattaccctcctgccagtgagcactggagtgcccactacagatgca
gggaacaaccagcagctgatgcagcagcagcccacagcagtgtcctcaaattactatacc
agcgccatcaccaccgcctccagccagcctgtcacctcatatgggatatcaacgcaggct
cagagcaccaacacagtagtcaccggaaccttccagaatgcaacagggggtatacccatc
cagcctgataacagagatgggcagcagcagcagcaacaacaacagcaacagatcctcatc
caaccacagcagatccttcagggcgcccagacgctccaatccatccagcaaggcacggtg
actacagcagggggccaggtgtttgccacaccgaccatctctcaggacgccctccaaaac
ctgcagatccagaccatccccaacagcgggcccatcctgctgcgcacggtaggggccaac
ggccaggtcagctggcagaccattcagctccagaacccaggaggggctcagatcacgctg
gctcccatgcagtccatcccacagctcgcacagacacagactggaggcacggtgcagctc
cagggcctgcagaccatcaacctgaacccgctgggcaacgccgggctgcagatgcaccat
ctgcaaggggtgcctattgccatcgccaacccagcaggagaccagagcatgcaaaatgca
actggcaacgacagcatggatgacgcagcactggaagagggcatggaaaccagcccgacc
cccaacagacgaacgcgccgagaagcctgcacctgcccctactgcaaggatggggaggga
cgtagagaccccaccaagaagaagcagcacatctgccacatccccggctgcaacaaggtt
tacggcaagacgtcccacctgcgcgcccacctgcgctggcacacaggagagaggccgttt
gtctgctcctggtccttctgtggcaagcgctttacccgttcggatgagcttcagcgacac
aagcgcacccacaccggcgagaagaagttctcctgtccagaatgtcccaagcgcttcatg
cgcagcgaccacctatccaagcacatcaagacccacttgaacaagaagggcacggcagtg
gcaggccagcccacttccgaatctgcttcccccgcccccatggcctcagacaacagcgcg
caacctgaggcgcccacacttatcaccatggagactctgtcgcctgagggcatcgccagg
ctagccagcagcggcattaacgtcatgcaggtgacggatatccattcactgaacatgaac
agcaatggctactga
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