Clupea harengus (Atlantic herring): 105901271 Help Entry 105901271         CDS       T09045                                  Symbol nphs1 Name (RefSeq) nephrin isoform X1   KO K24496   nephrin Organism char  Clupea harengus (Atlantic herring) Brite KEGG Orthology (KO) [BR:char00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:char04990]     105901271 (nphs1) Domain-containing proteins not elsewhere classified [BR:char04990]  Fibronectin (FN) domain-containing proteins   Fibronectin type III domain-containing proteins    105901271 (nphs1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ig_3 I-set C2-set_2 Ig_2 ig V-set fn3 C2-set_3 Ig_DSCAM-DSCAML_C NDNF X25_BaPul_like Motif Other DBs NCBI-GeneID:  105901271 NCBI-ProteinID:  XP_031432687 UniProt:  A0A6P8GAV7 LinkDB All DBs Position 11:complement(29681932..29745658) Genome browser AA seq 1280 aa AA seqDB search MQHFRQMISMTRQNKEYIFKLVKLDWWQPGTEHRRTSTMRSLLAKLPGSRCFLLPFTLIL GMQAQQAFRTQPRNVTVQAGTQAQLKCQVLRATGPVQWVKDGLLLGPQRSLPGFPRYRVI GDKRKGEYHLLIEDVALEDDALYECQAGQSDSSSAIISQTAWLNVQIPPLKPYIELESNE PWVAGKEYTVMCTASDAKPAAEITLFKGGIQLLDLDSVTMSGSEEQLMNTQAEVRVKAES ADHGGELVCKARNSALTTAMIDTKVMTVYFPPQAPVIEGLDITPVKAGDILKLSCLSHGG NPLASLYWTKNGELLSSSWEEDVVQRRSRSLLFLELTAEDNQAILHCESLNQVSQTPLFI SHMLTVFFEPVKVNLLGTFEAVEGQTVAFCCHTSSSNPPVEIRWWLGFRELNTTLLSKAK GENGGMTTMSNLTHTVSREENGLLLSCEAFNKGTQFSSSTSKILHVFYPPHRVWLHAPPE DVTLKSGHPVHLTCFSTGGNPTGQLTWFKNGRVIQGSSKQVSLKRGVSLELRFILQPSDN LAIYRCDVTNLSKKLLSAKTRLKVQFASIHVEIQVKPKVLRRGKTVSLDCLCGSSNPKAN ASWSVGFDRLAGVEMASRPAEYGGVSFRSNLSLTLTSQHHQQRVTCKAFSKLLSEAVSSS YTLNVLFPPEFSSEQPKEVKAVENDEVSLPLMVSANPTEMTCDWIFHGKKLDKETEWRYC WDDGFVLKIRNVTRNDAGVYNVECANEEGHSHTSTILNISYAPTFRMKPDVVFVDIGGTV DLLCEVEANPVISGMFSWKWLGNGEIDVESQHEDDTTGWLTLFQVTRAHTGTYQCTVDND IPPAAAAEVQLVVRFKPQLKKGPQWSKVASRADGVSTVDIACQAEGVPKVDFSWAKNKMP MDFANPRYMENTVRVGVVHTSTLSIENVSATLDYAVFTCTASNSLGEDSLDIQLLNTNHP ESPSDLRLLHVSNYSVTLEWKPGFDGGLTQKFRIRYLWKGFSSYHYVDVFPPKATFYTVT GLLPATTYNFSVNAVNNMGESSYADGNTALTVTTRGKDPAVDLHPPGDSNLTQESFGVWH YLSMVTVGVVILFTVICLSCVMLVRWRKDQKQTDVTGSVLKGSKTDTEGSLNVPERYINT ELMSTATSATASTIETNSTVYESYAGENGHYYSTIEESQPTFYTHMEGAEHHGPFGHDYE EVTNEEMQLNLQNFLPISHHSHPPLAADPCRGNQQQSFEQVYGKDIEDVDYAWRNNGPFI APTSPTMSSQLLFELGGELV NT seq 3843 nt NT seq  +upstreamnt  +downstreamnt atgcagcacttcagacagatgatatcaatgacgagacaaaacaaagagtacattttcaag ctggtgaagttggattggtggcagccgggcacggaacacagaaggacgagtaccatgagg agtttactggcaaagcttccaggatccagatgtttccttctcccctttactcttattttg ggtatgcaggcacagcaagctttcaggacacaacccaggaatgtgacagtgcaggctgga acccaggctcagctgaagtgtcaagtactgagagcaacaggaccggtccagtgggtgaag gacggcttactactgggaccccagagaagcttgccaggctttccacggtatcgcgtcatt ggggacaagcggaaaggggaataccatttgctgatcgaggatgtggccttggaggatgat gccctttacgaatgccaagctggacagtcagacagcagttcagcaatcatctcacaaacc gcctggctaaatgtgcagattccccccctgaagccatacatcgaactggagtcaaacgag ccatgggtggcagggaaagagtacacagtgatgtgtacagcttctgatgctaaacctgca gcagaaattactctgttcaaaggtggaatacaacttttagacctggactcagtcactatg tctggctcggaggagcaactcatgaacactcaagcagaagtgagagtcaaggcagagagt gcagatcatgggggagagttggtctgcaaggcaaggaattcagcactcactactgccatg attgacaccaaggtgatgaccgtttacttccctccccaggctcctgtgatagaaggcctg gacatcaccccagtcaaagctggggatattctaaaacttagttgcctgtcacatggagga aaccccctagcttctctgtactggactaagaatggagaacttttgtcaagtagctgggaa gaagatgttgttcaaagaagatccaggagtctgttattcttggagttgaccgcagaggac aatcaagccattctgcattgtgaaagtctcaaccaggtgtctcaaactccactcttcatc agccatatgctaactgtgttctttgagcctgtcaaggtgaatttactaggaacttttgaa gcggtagaggggcagacagtggcattctgttgtcacacaagctccagtaaccctcccgtg gagatacgttggtggttaggctttcgggaacttaacacaacacttctctctaaggcaaag ggtgaaaatggagggatgactaccatgtccaacctcacacatacagtttctcgagaagag aatggtctccttctctcgtgtgaggcattcaacaaaggcacccagttctccagcagcaca tcgaagatacttcatgtgttctatccaccacacagagtatggctgcatgctcccccagag gatgtaaccctcaaatcaggacacccagtgcatctgacatgtttctccactggagggaat cccacaggacagctgacatggtttaaaaatggcagggtcatacagggttcctctaaacag gtctccttaaagagaggtgtctccctggagctgagattcatccttcagcccagtgacaac ttggccatataccgctgtgatgttaccaacctgtctaagaaactactctctgccaagacc aggcttaaagtacagtttgcctcaatccacgttgaaatccaggtgaagcctaaggtcctg cggagggggaagactgtgagtctggactgcctgtgtggcagcagcaaccccaaagccaac gctagctggagcgtcggcttcgacaggctggctggggtggagatggccagcagaccggca gagtatggtggtgtgtcctttcgaagcaatctgtccctcactctcacctctcagcatcac cagcagagggtcacatgcaaagcgttcagcaaactgctctccgaggcggtcagctcctcc tacacactcaacgtgctttttcctcctgagttcagctcggagcagcccaaagaggtgaag gctgtagaaaatgatgaagtcagtctacccttgatggtgtccgccaatcccacagagatg acatgtgactggatctttcatggaaagaagctggacaaagagacagaatggcgatactgc tgggatgatggttttgtcctcaagatcagaaatgtgacaaggaatgatgcaggagtatac aatgtggagtgtgccaatgaagaaggccacagccacacctcaaccatcttaaacatttcc tatgctccaacgtttcgaatgaaaccagatgtcgtgtttgtggacattggtggaaccgta gatctactttgtgaggtggaagccaatcctgttatctctggaatgttctcctggaagtgg cttggaaatggagagatcgatgtggagtctcagcatgaggatgacactactgggtggctg accctgttccaggtcactcgtgcccacactgggacctatcagtgcaccgtggacaatgac atccctcccgcggcagcagcagaagtccagctcgttgttcgctttaaaccacaactgaag aaaggacctcagtggagtaaggtggccagccgcgctgatggtgtcagcacagtggatata gcatgtcaggcagagggcgttcccaaggtagatttcagctgggccaagaataaaatgcct atggatttcgccaatcccaggtatatggagaatactgttcgagtgggagtcgtgcatacc agcacactcagcattgagaatgtgagcgcaacactagactatgctgtcttcacctgcacc gcttccaacagcttgggggaggacagtctggacattcaactcctcaacaccaatcaccct gagtccccatcagacttgagactactgcatgtcagcaactactctgtgacactggagtgg aaaccagggtttgatggtggcttgacacagaaatttcgtatcaggtatctctggaaaggc ttctccagctatcattatgtggatgttttcccacccaaggcaacattctacacagtcact ggcctgttacctgcaaccacctacaatttttctgtgaatgctgtcaataacatgggagag agtagctacgctgacggcaatactgctctcactgttactaccagaggaaaagacccagct gtcgacctgcatcccccaggagacagtaacctcacccaagaatcctttggtgtgtggcac tatttgtcaatggtgacggtgggggtggtcatactgttcaccgttatctgtttgagctgc gtcatgttagtaagatggagaaaagaccaaaaacaaactgatgttacagggagtgttttg aaggggagcaagacagacacagaggggtctctaaatgtccctgagcgatacatcaacaca gagttgatgagtacagccacctctgccacagcaagcactatagaaacaaacagcactgtg tatgaaagctacgcaggggagaacggtcactattactctactattgaagaatcgcaacct accttctacacccatatggagggagcagagcaccatggaccctttggccatgactatgaa gaggtcaccaatgaagagatgcaactaaacctgcagaattttcttccaatatctcaccat tcccatccacctttggctgctgacccgtgtcgaggcaaccaacagcagagctttgagcag gtatatggaaaggatattgaagacgtggattatgcatggagaaacaatggacccttcatc gcacccacttctccaaccatgagctctcagcttctattcgagcttgggggggaacttgtg tga

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