Clupea harengus (Atlantic herring): 105901654
Help
Entry
105901654 CDS
T09045
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X2
KO
K11456
polyhomeotic-like protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105901654 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105901654 (phc1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
105901654 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
Borrelia_P83
EOS1
zf-FCS
SpoIIP
DUF2126
Tim54
DUF6080
Motif
Other DBs
NCBI-GeneID:
105901654
NCBI-ProteinID:
XP_031431677
Ensembl:
ENSCHAG00000020884
UniProt:
A0A6P8G7U6
LinkDB
All DBs
Position
11:9462525..9473421
Genome browser
AA seq
963 aa
AA seq
DB search
MEAGEDQNSGSANGNTQSGGNSRAPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINTAQLHNLAAVQQATLAASRQSSSPSNSVSQSTSSTHCTVNLSTSGGGTMTNPRPIG
PVTTVTSSALSQPVLLGGNTPGQGQNLYLRVNRPLRAPLASQLIFMPGGTATAAVATVAQ
QQPQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQEIPPTSMGQSDNDQV
QNLAMRCVSTPRVATVKTEFPERKDAATYSIAQQQQQFSQAVHQGPGPQQLQTNPQQLSN
PKLASYAHPNAPSMPGGMGVKGVSQPNMAANPAAGAGSAALPPSSSPSPSMPLSQLLLSS
SGLCQARAVTTVTPSATVTHILVPTSSVPTSSQGYTVGTMAPKANLGAQTLVVQPMQQQQ
QGVNTAAADKLSHSATPVPIQPKTIQVHRLPVQMPPRHPPPILPAPPSNGQAVGGHHPPH
VPVQLVGARQGTLGNSQAVALAHARSCFAQDGSVALGNNNAAPAGNGGNMVTMVTSMETG
AGGMCLKTPQSAVPISQLPGSQQAVLNPNHSSFSSSSSTPPVSIPLSMDGHNHNLVSAVA
PSSGDSVFMQSGPTPTKPVTSSLKRKSDSDAPNDLSGEPLPHCCPSVRDSAPPLSPVPSL
DTAPETAFSSPPTLLPLPRGGGCLGDRAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTG
IVKERAEGSMPMAVPPNIQSETGGSAVLKCEYCENYAPASQFGGTKRFCSKTCAKRYNVS
CSHHFRSSRGRAGGGGPPPAPPERDAVARRRGPRRSSSEIACAKIAGRHLPMKCRSESSR
SEDISSCDGEEEEEDSLSLSPSSSFSCPPPAHCGPQLDGSAPGGLPLDGSHFLSGSPAHW
SVDEVCRFISSLQGCEDLAPQFLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICASINN
LRD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggagaggaccaaaactctggctctgccaatggtaacactcagtcagggggg
aactcccgcgccccccagatcgctcacatgtctctgtatgagagacaagctgtacaggcc
ctgcaggcgctgcagagacaacccaatgcagctcagtacttccagcagctgatgctgcag
cagcagataaacaccgctcaactgcataacctcgccgctgtgcaacaggccactctcgcg
gccagtcgtcagtccagttcccccagtaacagtgtttcccagtccaccagcagcacccac
tgcactgtcaacctaagcacctctgggggtggcaccatgactaacccgcggcccatcgga
cccgtcaccacggtcacgtcttcagccctcagccagccggtgctgctgggggggaacact
cctggacaagggcagaacctgtacctgagggtcaaccggcccctcagggcaccactggcc
tcccagctcatctttatgcctggtggcacagcaacagctgccgtggcaacagttgctcag
cagcaaccgcagcagcagcagcagcagcagcagcagcaacaacaacagcagcagcaacaa
cagcagcagcagcaacagcagcaacatcaacagcagcaacagcagcagcagcagcagcag
caacagcaacaacaggaaatccctcctacctccatgggccaatcagacaatgaccaggtt
cagaacttggccatgcgctgtgtgtccactcctcgcgtggcaacagtgaagactgagttc
ccagagcggaaggatgcagccacatactccatcgcccagcagcagcagcagttctcccag
gcagtgcaccagggcccaggtccccagcagctccagaccaacccacagcagctctccaac
cccaaactggcctcttacgcccaccccaacgctcccagcatgcctggcggcatgggtgtc
aagggcgtcagccagcccaacatggctgccaaccccgccgctggcgccggctccgctgcc
ttgccgccctcctcctccccctccccctccatgcccctttcccagcttctgctctcttcg
tcggggctgtgccaggcgcgcgccgtgaccacggtcacgccatctgccaccgtcacacac
atcctggtgcccacctccagcgtgcccacgtcctcgcagggctacacggtgggcacgatg
gcacccaaggccaacctgggcgcccagactctggtggtgcagcccatgcaacagcagcag
cagggagtaaacaccgctgcggccgataaactgtcacacagcgccacgcctgtgcccatc
cagcccaagaccatccaggtccaccggctgcccgtgcagatgcccccacgccacccccct
cccatcctccctgctccccccagcaacgggcaggcggtgggggggcaccacccgccccac
gtccctgtgcagctggtcggagccagacagggaactctgggaaactcccaagccgtggca
ctggcgcatgcccgaagctgcttcgcccaggacggcagcgtagccctgggcaacaataac
gccgcacccgccggcaatggcggcaacatggtcaccatggtgacgtccatggagacgggg
gcgggaggaatgtgccttaagactccccaaagtgccgtgccgatcagccagctgccaggc
agtcagcaagcagtgttgaaccccaaccactcctccttctcctcctcgtcctccactcca
cccgtctccatccccctctccatggacggacataaccataacctggtgtctgctgtggcg
ccctccagtggagactctgtgttcatgcagtccggaccaacaccgactaagcctgtgacc
agctccttgaagaggaagtcggattctgacgcccccaacgacctgtcaggagagcccctc
cctcactgctgtccgtcagtgcgagactccgcccctcctctctcaccagtaccctccctt
gacacagctccagagacagccttttcctctcctcccactctcctgccgctgccacggggc
ggtggttgcctgggcgaccgggcccccctcccccaggctgtggtgaagcctcaggtgctc
actcacctgattgaaggtttcgtcatccaggagggcgccgagcccttccctgtgactgga
atagtaaaggagcgagcagagggttccatgcccatggcagtcccgcccaacatccaatca
gaaactggaggctctgcagtgctgaagtgtgagtactgtgagaactacgctccagccagc
cagttcggagggaccaagcgcttctgctccaagacctgtgcaaagaggtataatgtcagc
tgcagtcatcacttccgcagcagcagggggagagcgggaggcggtggtccccccccggcc
cccccagagagggacgctgtggccaggcgcaggggtcctcgcaggagcagctctgagatt
gcctgcgctaaaatagcaggaaggcatttacctatgaagtgtcgctctgagtctagccgt
tcagaggacatctccagctgtgatggtgaggaagaggaggaagactccctgtccctctcg
ccaagctcctccttctcctgccctccccccgcccactgcgggccccagttggacggctca
gcccctggcggcctgccattggacgggtcacatttcctgtcgggcagccccgcccactgg
agtgtggatgaagtgtgtcgattcatttcatctctgcaaggctgtgaggacctggcgcct
cagttcctgtcgcaggagattgacggacaggcgctgctgctcctgaaggaggaacacctc
atgtccaccatgaacatcaaactgggaccagcgctcaagatctgtgcctccatcaataac
ctgagagactga
DBGET
integrated database retrieval system
