Clupea harengus (Atlantic herring): 105901924
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Entry
105901924 CDS
T09045
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
105901924 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105901924 (gli2a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
105901924 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
FOXP-CC
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
105901924
NCBI-ProteinID:
XP_031438157
Ensembl:
ENSCHAG00000017733
UniProt:
A0A6P8GRS0
LinkDB
All DBs
Position
2:10275238..10376738
Genome browser
AA seq
1530 aa
AA seq
DB search
METSAPTATEKKELKSSGLDGSSFTDLPKKPSPTTVTRAPHIFPTFHAPIPIDIRHHEGR
YHYEPHPLHGMHGPPGLTGSPVMSDVSLIRLSPHAAATGESPFSPPHPYVSPHVEHYLRS
VHSSPTLSMISAARGLSPADVAAAVTHEHLKERGLFGLPPPPPGASAAEYYHLMAASHRS
PYGELLMQTGAAAAAAAAAAAAAHLPDYMSPVDMSRFPSPRLTPRLSRKRALSISPISDA
SIDLQTMIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHPITPVAYQQLLS
HQRGLSAFGHTPPLLQHSASLISRQPHLGVAAAPHPVPNTTTTIPGECVQNAAGESAVSS
TVNPMITKRTKVKTEADGPRPISPCSQDHIDLREELDKDECKQEPEAVYETNCHWEGCTK
EYDTQDQLVHHINNEHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHRCT
FEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVC
KIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRNDCPSKNQPPKGNGENEGGNKGGRGA
DGAIEANSTTKGVDDCLQVKSIKTENSVMYHSSPGGHSSCSSEPSPLGSATNNDSGVEMA
LHSGGDSLGDLSGLDEAPMAADSTGSPGGVGLQLRKSRGGALLRLDQLKQEKLKSVRDSC
SWGNNGPAAPPQIRNTKLPPIPAVGSLLEGSNMGYTGCLPTPRIGSGIGELTTCEVTLLN
QLNERRDSTTSTLSSAYTMSRRSSGISPCYSSRRSSETSQFGGSRHNNISAASYDSYDPI
STDLSRRSSEASQCGGLGGGGGGGGGLGGGGSGHPGMLSLTPAQHYRLKAKYAAATGGAP
PTPLPNMERMSLRTRMALYGDSQERSAYLFHPSAAGTSASRRCSDTGYGAPGMMPHEVPN
SLPRRASDPVRRPAQDPLSLPRVQRYNSVSTMNTSRLTGDRRGFSGGLTAGNTWSDGSLH
RHPFAQRPPSISENVVMETMALDQADDDMVLPDDVVQYLRTQNGSSTQDTPAGNYTGGQP
QDFQSNMTVQQQPQPQQHQQQFYGQRRMAMMDANMIPSANGQGMASCQMGPPRPQQQQFP
APAGISKSSMPVQWNEVSSGTVDSMERVPKQQQQQQQQQQQQLLRSNLAVVQQKQNFGAY
HQGFQGSNQQIVHMSQNLAAMQQGYAMQRNAQRMTSLLHQQQQQQQQQQHRQPSSSTNPC
LVPDTLSGNASQHALLGNMALPNGRAVMTQQNPDAQQQYRSGSAYVNPTGQQSFAVPSQM
PVQNGNRPLIQPRPPAEPRSSGRQPHPGLNTMQPNGFLQSNLNSEYGTSEASPKRTGPGG
HQENRDSIRSNHANSGGMFYSGEIHMLDPNVSFDAPMSPCASQDAATNMAAMASPGVNQV
TSTVDSQPVEHAQIDFDAMLDDGDHSSLMSGTLSPGLLQSLSQSSSRLNTPRNSVTLASV
PSGISNMAIGDMTSMLTALAEESKFLNMMA
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagctcccaccgccactgagaagaaggagctgaagagctccggcctggac
ggcagcagcttcaccgacctccccaagaaaccctctcccaccacagtgacccgagctcca
cacatcttcccgacgttccatgcgcccatcccgatcgacatccgccaccacgagggaaga
taccattacgagccgcaccctctccacggcatgcatgggcctccaggtttaaccggcagt
cctgtcatgtcggacgtgtctctcatccgcctctcccctcacgcggcggccacgggggag
tctcccttcagccccccgcacccctacgtcagcccccacgtggagcactacctgcgctcc
gtccactccagccccaccctctctatgatctccgccgccaggggcctcagccccgcagac
gtagcagcggcagtcacccatgagcacctaaaggagaggggtctgttcgggctgcccccc
ccgccccccggggccagcgctgcggagtactaccacctgatggccgccagccaccgcagc
ccctacggggagctgctcatgcagaccggggcagccgccgccgcagccgcagcagccgca
gccgccgcacatctgccagactatatgagccctgttgacatgtcccgtttccccagccct
cggctcactccccgtctgagccggaagagagctctgtccatctcgcccatctcagatgcc
agcatcgacctgcagaccatgatccgcacctcgcccaactccctggtggcctacatcaac
aactcccgctccagctccgccgccagcagctcctacgggcacctgtccgtcgggggcatc
agtccctcgttcacgttcccccaccccatcactcccgtggcctaccagcagctgctgtct
caccagaggggtctgagtgccttcggacacaccccgcccctcctgcagcactccgcctcc
ctcatcagccgacagccgcatctgggggtcgccgccgccccccaccccgtccccaacacc
accaccaccatcccgggagagtgtgtccagaatgctgctggtgagtcggccgtcagcagc
acagtcaaccccatgatcaccaagaggaccaaggtgaagacagaagcagacggacctcgg
cccatctccccctgctctcaggaccacattgacctgcgagaggagctggataaagacgag
tgcaagcaggagcctgaggccgtgtacgagaccaactgccactgggagggctgcaccaag
gagtacgacacccaggaccagctcgtgcatcacatcaataacgagcacatccacggggag
aagaaggagtttgtgtgtcgctgggaggagtgctcccgggagcagaagccctttaaggcc
cagtacatgctggtggtgcacatgaggaggcacacaggggagaaaccacacaggtgcaca
tttgagggctgtgccaaggcgtactcccgcctggagaacctgaagacccacctgcgctcc
cacaccggggagaagccctatgtgtgcgagcacgagggctgcaacaaggccttctccaac
gcctcggaccgagccaaacaccagaaccgcacacactccaacgagaaaccgtacgtgtgt
aagatccctggctgcaccaagcgctacaccgaccccagctccctgaggaagcacgtgaag
acggtccacggtccagaggcgcacgtcaccaagaaacagcggaacgactgcccttccaaa
aaccagccgcccaagggcaacggagagaacgaggggggcaacaaaggaggaaggggggca
gatggcgcaatagaagccaacagcaccaccaaaggagtggacgactgcctgcaggtcaag
tccatcaagactgaaaactctgtgatgtatcactccagcccaggcgggcactcgtcctgc
agcagcgagccgtcgccgctcggcagcgccaccaacaatgacagcggagtagagatggcc
ctgcacagcgggggggacagcctgggggacctgagcggcctggacgaggcccccatggcc
gccgactccaccgggtccccagggggtgtgggcctgcagctgcgtaagagccgcggaggg
gcgctgctgcggctggaccagctcaagcaggagaagctcaagagcgtcagggactcgtgc
tcctgggggaacaacggcccggctgccccgccgcagatccggaacaccaaactacctccc
atcccagctgtcggttccttacttgagggttcaaacatgggctacacaggctgcttgcca
accccccgtatcggcagcggcatcggcgagctgaccacctgcgaggtgacgctgctgaac
cagctgaacgagcgccgcgacagcaccaccagcacgctgagctccgcctacaccatgagc
cgccgctcgtcaggcatctcgccctgctactccagccggcgctccagcgagacctcgcag
ttcggcgggagccgccacaacaacatcagcgccgcctcctacgactcctacgaccccatc
tccaccgacctgtccagacgctccagcgaggccagccagtgcggaggcctcggaggaggt
ggaggaggaggaggagggctgggtggaggtggtagcggccatccgggtatgctcagcctc
accccggctcagcactaccgcctgaaggccaagtatgcggccgccaccgggggcgccccg
ccgacgccgctgcccaacatggaacgcatgagcctgagaacgcgaatggcgctctacggg
gactcgcaggagcgttccgcttacctgttccacccgtcggccgcgggtacgagcgcatcg
agacggtgcagcgacaccgggtatggtgctcccggtatgatgccacacgaggtgcccaac
agtcttccacggcgtgccagtgaccccgtgcgccgccccgctcaggatcccctgtcgctg
ccacgggtgcagcgctacaacagcgtgagcaccatgaacacctcacgactgactggcgac
cggcgaggcttcagcggcggcctcacggctggcaacacatggtccgacggcagcctgcac
cgccaccccttcgcccagcgcccgcccagcatctcggagaacgttgtcatggagacgatg
gcactggaccaggccgacgacgacatggtgcttccagacgacgtggtccagtacctcagg
acgcagaacggcagctcaactcaggacacaccggcgggtaactacaccggaggccaaccg
caagacttccaaagcaacatgacagtccagcagcaaccccaaccacagcagcatcagcag
cagttctatgggcaaagacgcatggctatgatggatgctaacatgatcccttcagctaac
ggccagggaatggcatcctgtcagatgggcccccccaggccccagcagcagcagttcccc
gccccagccggcatcagcaagagcagcatgcccgtgcagtggaacgaggtcagctcaggg
acggtggactccatggagagggttcccaagcaacaacagcaacagcaacagcagcagcag
cagcagctcctccgcagcaacctcgccgtggtccagcagaagcagaacttcggcgcctac
caccagggcttccagggatccaaccagcagatcgttcacatgagccagaacctggcggcc
atgcagcagggatacgccatgcagaggaatgcccagcgcatgacctccctcctgcatcag
cagcagcagcagcagcagcagcagcagcacaggcagccatcctcctccaccaacccatgc
ctggtgcctgacactttatcagggaacgcaagccagcacgcactgttaggcaacatggcc
cttccgaatggcagggcggtgatgacgcagcagaaccctgacgcgcagcagcaatatcgg
tcaggatccgcctacgtgaatcccaccggccagcagagttttgcggttccctcccagatg
cccgtgcagaacgggaacaggcccctgatccagcctaggcctcctgcagaacccagatct
tcaggcaggcagccgcacccgggcctgaacacaatgcagccaaacgggttccttcagtcc
aacctgaactccgagtacggaacctcagaagccagccccaagagaaccggccccggaggt
catcaggagaacagagacagcatcagaagcaaccacgccaacagtggtggcatgttctac
tcaggcgagatccacatgctagatcccaacgtcagtttcgacgcgcccatgtctccctgt
gccagccaggatgcagccaccaacatggccgccatggcctctccaggggtcaaccaggtc
accagcacggtggactctcagccggtggagcacgctcagatcgacttcgacgccatgctg
gacgacggggaccactccagcctcatgtcgggcacactcagtccaggcctcctccagagc
ttatcccagagttcgtcgcggctgaacacgccacgcaactctgtaacgctggcctcggtg
ccctcggggatcagcaacatggcgatcggagacatgacctcgatgctcacggctctcgca
gaggagagcaagttccttaacatgatggcttaa
DBGET
integrated database retrieval system
