Clupea harengus (Atlantic herring): 105902943
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Entry
105902943 CDS
T09045
Symbol
irg1l
Name
(RefSeq) immunoresponsive gene 1, like
KO
K17724
aconitate decarboxylase [EC:
4.1.1.6
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
105902943 (irg1l)
Enzymes [BR:
char01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.6 cis-aconitate decarboxylase
105902943 (irg1l)
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GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
105902943
NCBI-ProteinID:
XP_031443233
Ensembl:
ENSCHAG00000023849
UniProt:
A0A6P8GXP3
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All DBs
Position
20:8650233..8656189
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AA seq
496 aa
AA seq
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MLSKVKKAITPLSAIRGLHKSALDVVERPAPEDTVTSSFGRFIQGVQPQHLSPTVLQRSK
RMVLDSLGVGLIGSTTEVFQLALQHCQHMYAPDDISSVYGRKNTRLSPTLAAFVNGVASH
SMDFDDTWHPATHPSGAVLPALLAISDMLPSNSKPSGLDFLLAFNVGIEVQGRLLRFSNE
ARNIPKRFHPPTVVGTMGSAAACARLLSLEHTQCSHAMAIAASLSGAPMANAATQSKPFH
IGNAARLGLEAALLASRGLEASPLVLDAVPGVSGFSAFYEDYAPKALPLPDNDEPHGFLL
EEQDMGFKRFPAHLGMHWVADAAATVHETLVGLTGGRVAPGAVREVLLRIPLSKYINRPF
PESEHQARHSFQFNACTALLDGEVTVQSFSDEAMQRPDLHALLARVRVEHPADNPANFDR
MYAEVVVTLEGGDVLLGRCDTFYGHWRNPLSNDSLRKKFRSNAGAVLPEERVEGLIQAVE
QLDRLGDCQPLLTQIQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctctccaaagtaaagaaggccatcactcccctgtcagccattcggggcctgcacaag
tcagctttggatgtggtggagcgtcctgccccagaggacacggtcaccagcagctttggc
cgctttatccagggggtgcagcctcagcacctctcccccacagttctccagcgcagcaag
cgcatggtgctggacagcctgggcgtgggcctgatcgggagcaccaccgaggtgtttcag
ctggcactgcagcactgccagcacatgtatgctccggatgacatcagctctgtgtacggc
cgcaagaacacaaggctctccccgaccctggcagccttcgttaatggcgtggcatcccac
tcgatggactttgatgacacctggcatcctgccacccatccctctggtgctgttctgccc
gccctattggccatcagcgatatgttgccgagcaacagcaagccaagcggtctggacttc
ctgttggcgttcaacgtgggcatcgaggtccagggcaggctgttgaggttctccaacgag
gctcgcaacatcccaaaaaggttccatcctcccacggtggtgggtaccatgggcagcgcc
gcggcctgtgcccgcctgctttctctcgagcacactcagtgcagccacgccatggccatt
gccgcctcgctgtcgggcgcgcccatggctaatgccgcaacgcagtctaagcccttccac
atcggcaacgcggcccgcctgggcctggaggcagcactgttggcctctagaggcctggag
gccagccctctggtgctggacgccgtccccggggtgtcaggcttcagcgccttctacgag
gactacgccccaaaggccctgccattgcctgacaacgacgagccccacggcttcctgctg
gaggagcaggacatgggcttcaagcgtttcccagcgcacctggggatgcactgggtggcc
gatgcggctgccaccgtccacgagaccttggtggggctgacgggtggccgggtggccccg
ggggccgtgcgcgaggtcctcctgcggatcccgctgtccaagtacatcaaccgtccattc
ccggagtcggagcaccaggcgcgccactcgttccagttcaacgcctgcacagcgctgctg
gacggcgaggtgacggtgcagtctttctccgacgaggcgatgcagcggccggacctgcat
gcgctgctggcgcgtgtgcgcgtggagcaccctgccgacaacccagccaacttcgaccgc
atgtacgccgaggtggtggtgacgctggagggcggcgacgtgctgctcggccgctgcgac
accttctacggccactggcgcaacccgctgagcaatgacagtctgcgcaagaagttccgc
agcaacgccggcgccgtgctccccgaggagcgggtcgaggggctcatccaggcagtggag
cagctggaccggctgggagactgccagcctctcctcacccagatccagtga
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