KEGG   Clupea harengus (Atlantic herring): 105903027
Entry
105903027         CDS       T09045                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105903027
Enzymes [BR:char01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105903027
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105903027
  Multi subunit type E3
   KPC complex
    105903027
SSDB
Motif
Pfam: TPR_RNF123 SPRY zf-C3HC4_3 zf-RING_2 zf-C3HC4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 105903027
NCBI-ProteinID: XP_031424393
Ensembl: ENSCHAG00000003673
UniProt: A0A6P8FLB5
LinkDB
Position
5:30548318..30643980
AA seq 1319 aa
MSSKGGGTALSRRNYRLASDTEKPKATGIVNEKLLSDYLHHVFPSACKYGLTSAAYRKTL
TFQDLDAHLEHLLSEGELPEESRDQAADGRLGPSTVVLDHTSGFEGLLFVDDDLLGVIGH
SNFSSIRATTCVFKGKWVYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRV
RKWNVTTTNYGKSWAAGDIVSCMIDLDDGTITFCLNGQSLGTAFSNIKMGPGIAYFPAIS
LSFKESVAFNFGSRPLRYPVEGYRPLQDPPTADLLKANRLLGYMKTVLSTTIDTQEEKVV
EKDSACWQLHGEPTVLVTLAHVFNHFAPLMCKVYLVEDVLMNFLLTILEGGGSVDEHPLI
QQLLDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSR
KYLLNNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTRFDKEGRDEHEVREETAD
ERLRRRAYERGCQRLKKRIEVVEELQVQILRLMLNNKDKGTGQASRYIFLNKFRKFLQEN
ASNRANPTVLCPPEYMVCFLHRLISAVRSCWDEGKRKNGATVSSEDGYVPPQLFYNGKVD
YFDLQRLGGLLSHLKKTLKDDLASKANIIIDPSEILPSSMDDLDEDEESGAAQRPLGAAA
TGGAPVRPSWLSSPTLGRANRFLSTAAVSLMTPRRPLAPPEKVKVRTLAVEQRTEEDIEG
NHGNDGLLLGRPMEEPEQPITEKSLLEILDGIVMMYNLSVHQQLGKMVVVSDDVHEYAVA
LKDTEEKIARCPSRRADILDELVKSQKVFAEKLNHLSRRLAWINATIYSKEKMLDVYWLL
RVCICTIEHADNTGSLFAFNPEFYLNVAMNSYSALKNYFSPANSMDELPGYEETLTQLAA
ILAKHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPENQRVAMMRNLLAPYEQRP
WAQTNWILVRFWKGCGFGYRYTRLPHLLKTKPEDATLPSLQRDLSIASFQKPCPSLLLQR
HMAELLRHDKDMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCAT
CFDLSVSLLRVLEMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAERNLFDRVV
NLRLPGLESVDHYPILVAVTGILVRILVEGDRQGVARAASVLLSDPCFQLHSIQHLLGEG
EASATATATATGTATGTERKHFSLHAYTDYISAEEELKVEQMLAFLTEESKQAAASTAPT
SEEDLCPICYAHSISAIFKPCSHKSCKACINQHLMNNKDCFFCKATILGVEDYIKPAGS
NT seq 3960 nt   +upstreamnt  +downstreamnt
atgagctctaaggggggaggcacagccttgagccgtcgtaactaccgcctggcctccgac
actgagaaacccaaagccacaggaattgtgaatgagaagctgctgagtgactacctgcac
catgtgttcccctcggcctgcaaatatggactcacatcagctgcatacaggaaaacttta
accttccaggacctggacgcccacctggagcacctgctgtcggagggcgagctcccagag
gaaagccgagatcaggcagctgatgggcgtcttggtccctcgacggtggtgttggaccac
actagtggctttgaaggccttctctttgttgatgatgatctccttggggtcattggccac
agcaatttcagctccatcagagctaccacttgtgtattcaaagggaagtgggtgtacgag
gtgctcatctcatcccaaggtctgatgcagatcggttggtgcacgctcaactgcaggttc
aatcaggaggagggtgttggtgacacacctgactcatatgcttatgatgggaacagggtg
cgcaagtggaatgtcaccactacaaactatggcaagtcatgggcggcaggagacattgtc
agctgtatgatagacttggatgatggcaccataacattttgtctaaatggccagtccctg
ggcacagccttcagtaacattaagatgggtccgggcatcgcatactttcctgccatcagt
ctttccttcaaagagtcagtggctttcaattttgggagccgcccgctcagatatcccgtg
gagggatacagaccactgcaggaccctcctaccgcggaccttctcaaagccaatcggctg
ctgggctacatgaaaaccgtgctgtccacaaccattgatacccaggaggagaaggttgtt
gaaaaagacagcgcgtgttggcagcttcatggagagccaacagttctggtcaccctcgcc
cacgtttttaaccactttgctccactgatgtgtaaagtgtatctagtggaggacgtgttg
atgaacttcctgttgacaatcttggaaggcgggggttcagtggatgaacatcctctcatc
cagcagctcctggacctgttctggctgctcatggaggactatgaagtgaacgagtgcctg
aagcagctgatgatgtctctcctgcgggcctatcggttctctcccatcatccctgacctg
ggtttccagattcactacttgcgtttgaccacagccatcctacgtcatgagaagtccagg
aaatatctgctcaataatgtcttgtttgacgtgttgcgctccgtagtattcttctatatt
aaaacaccgctgagggtgaaggaggccggcctggaggagctcatccctacgacatggtgg
cccacacgctttgacaaggagggacgagatgagcacgaggtgagggaggagactgcagac
gagagactcaggagacgagcgtatgagcgcggctgccagaggctcaagaagaggattgag
gtggtggaggagctgcaggtgcagatcctgaggctcatgttgaacaacaaggacaaaggg
acggggcaagcttctagatatatattcttgaacaaattccggaagtttcttcaagagaat
gccagcaacagagcgaacccaacggtgttgtgtcctcccgagtacatggtgtgtttcctg
catcggctcatcagcgccgtcagaagctgttgggacgagggcaagaggaagaacggggcg
actgtaagcagtgaggacggctatgtcccacctcagctgttctacaacggaaaagtggac
tactttgacctgcagaggctgggagggctcctgtctcacctgaagaagactctgaaagat
gacctggcctccaaggcaaacatcatcatcgacccctccgagattctgccctcgtctatg
gatgacctcgacgaggatgaagagagcggagctgcccagaggccccttggagccgctgcc
actggaggtgcccccgtgcgtcccagctggctgagctcgcccactctgggccgggccaat
cgctttctcagcacagccgccgtcagcctcatgaccccacgccgacccctcgccccccct
gagaaggtcaaggttcgaacgttagccgtggaacaacggactgaggaagacattgaggga
aaccatggtaacgacggattgttgctggggcgaccaatggaagagccggagcagccaatc
acagagaagtcacttctggagatcttggatgggattgtgatgatgtacaatttaagtgtc
catcaacagcttggcaagatggtggtggtgtcggatgatgtgcatgagtatgctgtggcc
ctcaaagacacagaggagaagatagccaggtgccccagcaggagagcagacatactggat
gagctggtgaagagccagaaggtgtttgctgagaagctgaaccacctgagtcgaaggctg
gcctggatcaatgccaccatctattctaaggagaagatgttggatgtgtactggctgctg
agagtgtgtatttgcacgattgagcatgctgacaacaccggctctctgtttgccttcaac
cctgagttctacctcaatgtggccatgaacagctacagcgcactcaaaaactactttagc
ccagccaacagcatggacgagctaccaggctatgaggaaacactcactcagctggctgct
attcttgctaagcactttgcggatccacgcatagtggggacagacatcaaagactccctc
atgcaggccctagccagctacgtgtgctaccctcaatccctcagggctgtggagaggatc
ccagagaaccaacgtgtggccatgatgaggaatctgctggccccctatgagcagaggccc
tgggctcagaccaactggatcctggtgcgcttctggaagggttgtgggtttggctacagg
tacacccggttgcctcatctacttaaaaccaaacctgaggatgccacactgcccagcctt
cagagagatttgtccattgctagctttcaaaagccctgtccatcactcctgctgcagaga
catatggcggagctgctgaggcacgataaggacatggctgccagctttctgaacagcgtt
ctcaaccagctcaactgggccttctccgagttcatcggcatgattcaggagattcagcag
gccgccgagagaccggagcgaaacttcgtggacacgcggcagctgaaggtctgtgccacc
tgcttcgacctgtctgtcagcctgctgcgtgtgctggagatgacggtcaccttggtgcca
gagatatttcttgactggtcccgcccctcagcggaactgttgctgcgacgattagctcag
ctgttgaaccaggtgctgaaccgtgtgacggccgagaggaacctctttgaccgcgtggtc
aatctgcgtctaccaggactggagagtgtggaccactaccccatacttgtagcagtgaca
ggcatcctggtgcgcatcttagtggagggcgacagacagggagttgcaagagcagcatcc
gttctcctttcagacccctgtttccagcttcactccatccagcacctgcttggggagggg
gaagccagtgcgacggcgactgcgactgcgactgggactgcgaccgggactgagcgcaag
cacttctctctacatgcctacacggactacatcagtgcagaagaggaactgaaggtggaa
cagatgttggcttttcttacagaggaatcgaagcaggctgcagccagtacagcacccacc
agtgaggaggacctgtgtcccatctgctatgcacactcgatctctgccatcttcaagccc
tgctcacacaagtcttgcaaagcctgcatcaatcagcatctgatgaacaacaaggactgc
ttcttctgcaaggctaccatcttgggtgtggaggattatatcaagcctgcggggtcttag

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