Clupea harengus (Atlantic herring): 105903142
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Entry
105903142 CDS
T09045
Symbol
rela
Name
(RefSeq) transcription factor p65
KO
K04735
transcription factor p65
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04137
Mitophagy - animal
char04210
Apoptosis
char04218
Cellular senescence
char04620
Toll-like receptor signaling pathway
char04621
NOD-like receptor signaling pathway
char04622
RIG-I-like receptor signaling pathway
char04623
Cytosolic DNA-sensing pathway
char04625
C-type lectin receptor signaling pathway
char04920
Adipocytokine signaling pathway
char05132
Salmonella infection
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105903142 (rela)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105903142 (rela)
09143 Cell growth and death
04210 Apoptosis
105903142 (rela)
04218 Cellular senescence
105903142 (rela)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105903142 (rela)
04621 NOD-like receptor signaling pathway
105903142 (rela)
04622 RIG-I-like receptor signaling pathway
105903142 (rela)
04623 Cytosolic DNA-sensing pathway
105903142 (rela)
04625 C-type lectin receptor signaling pathway
105903142 (rela)
09152 Endocrine system
04920 Adipocytokine signaling pathway
105903142 (rela)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105903142 (rela)
09171 Infectious disease: bacterial
05132 Salmonella infection
105903142 (rela)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105903142 (rela)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
105903142 (rela)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
105903142
NCBI-ProteinID:
XP_012686307
Ensembl:
ENSCHAG00000013762
UniProt:
A0A6P3W0N3
LinkDB
All DBs
Position
18:17756850..17775304
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AA seq
635 aa
AA seq
DB search
MAGMFGWSQQPPVPSGTPYVEIIEQPKARGMRFRYKCEGRSAGSIPGEKTNETTKTHPAI
KIHNYSGPIRVRISLVTKSQPYKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVK
KKDVAEAVSCRLQTQNNPFNIPEAKVWEEDYDLNAVRLCLQVSITMPNGDLHPLDPQVSQ
PIYDNRAPNTAELKICRFNKNSGTCRGGDEIFLLCDKVQKEDIEVRFFRDSWEGKGSFSQ
ADVHRQVAIVFRTPAYCDANLTAPVHVKMQLRRPSDREVSEPVDFQYLPSDPDEYRLIEK
RKRTEGMFKQLSSIGPGVIGSERRPFPTARRTMPAAKPPAAALLAAPTFYGPPPGQLFTQ
PKAEASSSSNLHNDTWKFTSLTLDSQPKPSLLHPFISQAPATSTVTSTSASSTAQDYSTV
NLAQFHGLTFGGFPSSQDSGVANAAGRSNGDTGNRAVGAQTQAAMSQEAAQSFAGVQASQ
FKVEAPASDDEDFEFPSFSDQNNSGPLEHINLEDFQSLLAQTGLHGETPAGIGAQPVTCQ
LTCNPMTYGSATNTGNLVENVAINHTGNGSGSSSATLMNYPPSLSHLLNDCPIAPPSAQH
MSVSDDMILTSEDEERLMSIFAGPTQEHFLSGHPT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatgtttggctggtcacagcagccgcctgttccctcaggcactccgtacgtg
gagatcattgagcagcccaaggcgaggggtatgcgtttccgctacaagtgcgaggggcgg
tcggcgggcagcatcccgggggagaagactaacgaaaccaccaagacacatcctgcaatc
aagattcacaactacagcgggccgatccgcgtacgcatctcactggtgaccaagagccag
ccgtacaaaccacatcctcacgagctcgtgggcaaggactgcaagcatggctactacgag
gcagacctgcaggaaagacgtgtgcacagtttccagaacctgggcatccagtgtgtaaag
aagaaagatgtagctgaagctgtcagttgcagactacagacgcaaaacaaccctttcaac
attccggaggcaaaggtctgggaggaggactatgacctgaacgcagtgagactgtgtctc
caggtgtccatcacaatgcccaatggagatctacaccccctggatccacaggtctctcag
cccatctatgacaacagagcgcctaatacagcggagctgaagatatgccgattcaacaag
aactccggaacttgtcggggaggtgacgaaatcttcctgctctgtgacaaagtgcagaaa
gaggacattgaggtgcgcttcttccgggactcttgggaaggaaagggttccttctcgcaa
gcggacgtacaccggcaggtggccatcgtgttccgcacgcctgcgtactgcgacgcaaac
ctcacggcgcccgtgcatgtcaagatgcagctgcgccgaccctccgaccgggaggtcagt
gagcccgtggacttccagtacctgccatcagacccagatgagtacagactgattgagaag
cggaaacgcaccgagggaatgttcaagcagctgagctccataggcccaggagtcataggc
tcagaaagaaggccattccctaccgccaggagaacgatgcctgcagccaagcctccagca
gcggctcttttggctgccccaactttctacggccctcctcctggccagctcttcacccag
cccaaagcagaagcctcttcttcctccaacctccacaatgatacctggaagttcaccagc
cttaccttggacagccagcccaaaccctcgctcctgcacccctttatctcccaggcccca
gccacttctaccgtcacctccacctcagcctcctccacagctcaggactactctacggtt
aacctggcccaatttcacgggctgaccttcggtggtttccccagcagccaggactccggg
gtggcgaatgcggccggaaggagcaacggggacactgggaacagggcagtaggagctcag
acccaagcagccatgtcccaggaagcggcccagtctttcgccggggtccaggcctcccag
ttcaaagtcgaggctccggcgtcagacgacgaggatttcgagttccccagcttctctgat
cagaacaactcaggcccccttgaacacatcaacctagaagacttccagtcgctgttggct
cagactggcctgcatggcgagacgcccgcagggatcggggcacagccagtgacctgccag
ttgacctgcaaccccatgacctacggcagtgccacaaacacgggtaacctggttgagaat
gttgccatcaaccacactggaaatggcagcggcagcagcagcgccaccttgatgaactac
ccccccagcctcagtcatcttctgaacgattgccccattgccccaccttctgcgcaacat
atgtccgttagcgacgacatgatccttacctctgaagatgaggagcgcctaatgtccatc
ttcgccggtcccacccaagaacatttcttgtcaggtcaccccacttaa
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