KEGG   Clupea harengus (Atlantic herring): 105903142
Entry
105903142         CDS       T09045                                 
Symbol
rela
Name
(RefSeq) transcription factor p65
  KO
K04735  transcription factor p65
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04010  MAPK signaling pathway
char04137  Mitophagy - animal
char04210  Apoptosis
char04218  Cellular senescence
char04620  Toll-like receptor signaling pathway
char04621  NOD-like receptor signaling pathway
char04622  RIG-I-like receptor signaling pathway
char04623  Cytosolic DNA-sensing pathway
char04625  C-type lectin receptor signaling pathway
char04920  Adipocytokine signaling pathway
char05132  Salmonella infection
char05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    105903142 (rela)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    105903142 (rela)
  09143 Cell growth and death
   04210 Apoptosis
    105903142 (rela)
   04218 Cellular senescence
    105903142 (rela)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    105903142 (rela)
   04621 NOD-like receptor signaling pathway
    105903142 (rela)
   04622 RIG-I-like receptor signaling pathway
    105903142 (rela)
   04623 Cytosolic DNA-sensing pathway
    105903142 (rela)
   04625 C-type lectin receptor signaling pathway
    105903142 (rela)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    105903142 (rela)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    105903142 (rela)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105903142 (rela)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:char03000]
    105903142 (rela)
Transcription factors [BR:char03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    105903142 (rela)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 105903142
NCBI-ProteinID: XP_012686307
Ensembl: ENSCHAG00000013762
UniProt: A0A6P3W0N3
LinkDB
Position
18:17756850..17775304
AA seq 635 aa
MAGMFGWSQQPPVPSGTPYVEIIEQPKARGMRFRYKCEGRSAGSIPGEKTNETTKTHPAI
KIHNYSGPIRVRISLVTKSQPYKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVK
KKDVAEAVSCRLQTQNNPFNIPEAKVWEEDYDLNAVRLCLQVSITMPNGDLHPLDPQVSQ
PIYDNRAPNTAELKICRFNKNSGTCRGGDEIFLLCDKVQKEDIEVRFFRDSWEGKGSFSQ
ADVHRQVAIVFRTPAYCDANLTAPVHVKMQLRRPSDREVSEPVDFQYLPSDPDEYRLIEK
RKRTEGMFKQLSSIGPGVIGSERRPFPTARRTMPAAKPPAAALLAAPTFYGPPPGQLFTQ
PKAEASSSSNLHNDTWKFTSLTLDSQPKPSLLHPFISQAPATSTVTSTSASSTAQDYSTV
NLAQFHGLTFGGFPSSQDSGVANAAGRSNGDTGNRAVGAQTQAAMSQEAAQSFAGVQASQ
FKVEAPASDDEDFEFPSFSDQNNSGPLEHINLEDFQSLLAQTGLHGETPAGIGAQPVTCQ
LTCNPMTYGSATNTGNLVENVAINHTGNGSGSSSATLMNYPPSLSHLLNDCPIAPPSAQH
MSVSDDMILTSEDEERLMSIFAGPTQEHFLSGHPT
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggcaggcatgtttggctggtcacagcagccgcctgttccctcaggcactccgtacgtg
gagatcattgagcagcccaaggcgaggggtatgcgtttccgctacaagtgcgaggggcgg
tcggcgggcagcatcccgggggagaagactaacgaaaccaccaagacacatcctgcaatc
aagattcacaactacagcgggccgatccgcgtacgcatctcactggtgaccaagagccag
ccgtacaaaccacatcctcacgagctcgtgggcaaggactgcaagcatggctactacgag
gcagacctgcaggaaagacgtgtgcacagtttccagaacctgggcatccagtgtgtaaag
aagaaagatgtagctgaagctgtcagttgcagactacagacgcaaaacaaccctttcaac
attccggaggcaaaggtctgggaggaggactatgacctgaacgcagtgagactgtgtctc
caggtgtccatcacaatgcccaatggagatctacaccccctggatccacaggtctctcag
cccatctatgacaacagagcgcctaatacagcggagctgaagatatgccgattcaacaag
aactccggaacttgtcggggaggtgacgaaatcttcctgctctgtgacaaagtgcagaaa
gaggacattgaggtgcgcttcttccgggactcttgggaaggaaagggttccttctcgcaa
gcggacgtacaccggcaggtggccatcgtgttccgcacgcctgcgtactgcgacgcaaac
ctcacggcgcccgtgcatgtcaagatgcagctgcgccgaccctccgaccgggaggtcagt
gagcccgtggacttccagtacctgccatcagacccagatgagtacagactgattgagaag
cggaaacgcaccgagggaatgttcaagcagctgagctccataggcccaggagtcataggc
tcagaaagaaggccattccctaccgccaggagaacgatgcctgcagccaagcctccagca
gcggctcttttggctgccccaactttctacggccctcctcctggccagctcttcacccag
cccaaagcagaagcctcttcttcctccaacctccacaatgatacctggaagttcaccagc
cttaccttggacagccagcccaaaccctcgctcctgcacccctttatctcccaggcccca
gccacttctaccgtcacctccacctcagcctcctccacagctcaggactactctacggtt
aacctggcccaatttcacgggctgaccttcggtggtttccccagcagccaggactccggg
gtggcgaatgcggccggaaggagcaacggggacactgggaacagggcagtaggagctcag
acccaagcagccatgtcccaggaagcggcccagtctttcgccggggtccaggcctcccag
ttcaaagtcgaggctccggcgtcagacgacgaggatttcgagttccccagcttctctgat
cagaacaactcaggcccccttgaacacatcaacctagaagacttccagtcgctgttggct
cagactggcctgcatggcgagacgcccgcagggatcggggcacagccagtgacctgccag
ttgacctgcaaccccatgacctacggcagtgccacaaacacgggtaacctggttgagaat
gttgccatcaaccacactggaaatggcagcggcagcagcagcgccaccttgatgaactac
ccccccagcctcagtcatcttctgaacgattgccccattgccccaccttctgcgcaacat
atgtccgttagcgacgacatgatccttacctctgaagatgaggagcgcctaatgtccatc
ttcgccggtcccacccaagaacatttcttgtcaggtcaccccacttaa

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