Clupea harengus (Atlantic herring): 105903513
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Entry
105903513 CDS
T09045
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00052
Galactose metabolism
char00510
N-Glycan biosynthesis
char00513
Various types of N-glycan biosynthesis
char00514
Other types of O-glycan biosynthesis
char00515
Mannose type O-glycan biosynthesis
char00533
Glycosaminoglycan biosynthesis - keratan sulfate
char00601
Glycosphingolipid biosynthesis - lacto and neolacto series
char01100
Metabolic pathways
Module
char_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
char_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
105903513
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
105903513
00513 Various types of N-glycan biosynthesis
105903513
00515 Mannose type O-glycan biosynthesis
105903513
00514 Other types of O-glycan biosynthesis
105903513
00533 Glycosaminoglycan biosynthesis - keratan sulfate
105903513
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
105903513
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105903513
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105903513
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105903513
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
105903513
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
105903513
2.4.1.90 N-acetyllactosamine synthase
105903513
Glycosyltransferases [BR:
char01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
105903513
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
105903513
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of breast milk
105903513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
105903513
NCBI-ProteinID:
XP_012686733
Ensembl:
ENSCHAG00000020227
UniProt:
A0A6P3W147
LinkDB
All DBs
Position
22:complement(7017010..7022517)
Genome browser
AA seq
354 aa
AA seq
DB search
MTPNLSNNFTIVSKAWTVVVLLCAVHFTITLFYYILHPEERVTFLPNPQIPLSRARGDAL
AVIFNIMQATVNGTESPEIRNDELQTCLETSPLLVGPFQVQFSSQVTLEMVRQENPELQE
GGRWKPSDCIGLQRVAIIIPFRHRDEHLKYWLFYLHPLLQRQQLDYGIYVIEQDGETTFN
RAKLLNVGFAEALKEYDYDCLVFSDVDIIPMDDRNIYKCYSQPRHIAVSMDKFGFRLPYY
QYFGGVSALSKEQYLKINGLPNNYWGWGGEDDDIFNRLSIKGLSISRPNGVTGRCRMIRH
SRDAHNEPNPKRFYNIAHTRQTMEIDGINSLKYQVIRIVKDQLFTKIVVDIGRQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactcctaatttgtcaaataatttcaccattgtcagtaaagcctggactgtggtggtt
ttactttgcgccgttcatttcaccattactttgttttattacatcttacaccctgaggag
agggtaacttttttgcccaacccacagataccattgtcaagagcaaggggagacgctttg
gctgtaattttcaatataatgcaagcaacagtgaacggaactgaaagccctgaaattaga
aacgatgaactgcagacgtgtctcgaaacatcccctcttttggtgggcccttttcaagtc
cagttcagtagccaagtgactctggaaatggtgcgacaggagaatcctgagcttcaggaa
gggggccgctggaagccctcagactgtattggcctacagagagtggccataatcattccc
ttcagacacagagatgaacacttgaagtattggctcttctacctccacccccttcttcag
aggcagcagctagactatggcatctatgtcatcgaacaggatggagagaccacatttaac
agagccaagctgttaaatgtggggtttgccgaagctctgaaagagtatgactatgactgc
ctcgtctttagcgatgtggacatcatccccatggatgaccgaaatatctacaagtgctac
agtcaacccaggcacatcgctgtctccatggacaaatttggtttcaggctaccatattat
cagtactttggaggtgtttcagctcttagcaaagagcagtacttgaaaataaatggcctt
cccaacaattactggggctggggtggagaggacgatgacattttcaacaggctatccatc
aagggcctgtcaatctccagacccaatggagtaacagggagatgccgaatgatccgccac
agcagagatgcacacaatgagcctaaccccaaaaggttttataatatagcacatacaaga
caaacaatggaaattgatggcatcaattctttgaagtaccaagtaattagaattgttaag
gatcagctgttcactaaaatcgttgtggacattgggagacaatga
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