Clupea harengus (Atlantic herring): 105903806 Help Entry 105903806         CDS       T09045                                  Symbol sqstm1 Name (RefSeq) sequestosome-1 isoform X1   KO K14381   sequestosome 1 Organism char  Clupea harengus (Atlantic herring) Pathway char04137   Mitophagy - animal char04140   Autophagy - animal char04217   Necroptosis char04218   Cellular senescence Brite KEGG Orthology (KO) [BR:char00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     105903806 (sqstm1)    04137 Mitophagy - animal     105903806 (sqstm1)   09143 Cell growth and death    04217 Necroptosis     105903806 (sqstm1)    04218 Cellular senescence     105903806 (sqstm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:char04131]     105903806 (sqstm1)    03029 Mitochondrial biogenesis [BR:char03029]     105903806 (sqstm1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:char04147]     105903806 (sqstm1) Membrane trafficking [BR:char04131]  Autophagy   Mitophagy    Cargo receptors     105903806 (sqstm1)   Pexophagy     105903806 (sqstm1)   Aggrephagy     105903806 (sqstm1)   Xenophagy     105903806 (sqstm1)   ER-phagy    ER-phagy recepters     105903806 (sqstm1)   Other autophagy associated proteins    Midbophagy     105903806 (sqstm1) Mitochondrial biogenesis [BR:char03029]  Mitochondrial quality control factors   Mitophagy factors    Parkin-dependent mechanism factors     105903806 (sqstm1) Exosome [BR:char04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    105903806 (sqstm1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UBA_5 ZZ PB1 Med3 Motif Other DBs NCBI-GeneID:  105903806 NCBI-ProteinID:  XP_012687059 Ensembl:  ENSCHAG00000020888 UniProt:  A0A6P3W3F8 LinkDB All DBs Position 20:10510252..10515540 Genome browser AA seq 482 aa AA seqDB search MSMTVKAYLLGKEDCHKEIRRFAIDQDVSTSFEYLKGKVVDVFGNLRNVPFQMFYKDEDG DTIAFSSDDELIMGLTGVKNGTFRLFIKERREHKKDREFPHHVFPGFPFPPPPGAPHMPP GPPHEGPPGPPHAGPPGPPHMPPGPPHGGPHHPHMLHPGVTCDGCDGPVVGTRFKCTVCP DYDLCPSCQAKGLHKEHPLLPIWHPLNNMFEWFPRGKWMRKMRHCMWAGAQAQAQAQSQN QDQNQQGPCGSRPASQQAPEAAAEDPTQAEGTSNATQANVEYLKSIGEGVAAMLSPLGID VDIDVEHEGSRSKVNPTPPPSGGPSSNQSDGSSGASGKPVGRGTGGGPGSHSSVSSTSEG AKAQKEQGSDEEWTHLSSKEVDPSTGELQSLRLGEETEEGPEEPRPLSTSSSSSQGPTGL REAALYPHLPQDADPRLVESLSQMLSMGFTDDGGWLTRLLTTKNFDIGVALDTIHYSKGP PK NT seq 1449 nt NT seq  +upstreamnt  +downstreamnt atgtcgatgaccgtgaaagcctacttgttgggcaaagaggactgtcataaagagattcga cgctttgccattgaccaggacgtgtctacgagttttgagtatttgaaaggaaaggttgtc gatgttttcggcaatctgcgcaatgtccccttccaaatgttctacaaagatgaggacggt gacacgattgctttttcttctgatgatgaactcatcatggggcttacaggagtgaagaac gggactttccgtctcttcatcaaggagaggagagagcacaagaaagacagggagtttcct catcatgtcttcccaggattccctttcccccctcctcccggagccccccacatgccccct ggaccccctcatgagggtccccccggacccccccatgctggtcctcctggacccccccac atgcctcccggaccacctcacggtggccctcatcaccctcacatgttgcaccctggggtg acctgtgacggatgtgatggtccagtggtcgggacccgctttaagtgcacggtctgccct gactatgatctgtgcccctcctgccaggccaagggcctccacaaggagcaccccctgctt cccatctggcacccactgaacaacatgtttgagtggttccctcgtgggaagtggatgaga aagatgaggcactgtatgtgggctggagctcaggctcaggctcaggctcaatcccagaat caggaccagaaccagcagggtccatgtggatccaggcctgcctctcagcaagcccctgag gctgcagctgaggaccccactcaggcagaaggtacctcaaatgccacccaggccaatgtg gaatacctgaagagcatcggagaaggagtagctgccatgcttagtcccctgggcatagat gttgacattgacgtggagcacgaggggagtaggtccaaagtgaaccccacaccgcctccg tccgggggtccttccagcaaccagagcgacggcagctcgggggcaagtgggaagccagtg ggaaggggaacgggaggagggccgggcagccacagcagtgtcagcagcaccagtgagggg gcaaaggctcagaaggagcagggcagcgatgaggagtggacccacctgagctccaaagag gtggacccatctaccggggaactccagtccctgcgcctgggcgaggagacagaggaaggg ccagaggaacctcggccgctcagcaccagctcctcttcgtcccaggggccgacaggcctg cgtgaagctgccctctacccacacctaccacaagacgccgacccgcggctggtggagtcc ctgtcccagatgctctcaatgggcttcacagacgacggcggctggctgaccaggctcctc accaccaagaacttcgacatcggagtggccctggacaccatccattactccaagggtccc ccgaagtag

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