Clupea harengus (Atlantic herring): 105903928
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Entry
105903928 CDS
T09045
Symbol
gria2a
Name
(RefSeq) glutamate receptor 2a isoform X1
KO
K05198
glutamate receptor 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105903928 (gria2a)
04082 Neuroactive ligand signaling
105903928 (gria2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105903928 (gria2a)
Ion channels [BR:
char04040
]
Ligand-gated channels
Glutamate (ionotropic)
105903928 (gria2a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
105903928
NCBI-ProteinID:
XP_012687182
Ensembl:
ENSCHAG00000027466
UniProt:
A0A6P3W1S5
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Position
22:2408476..2428049
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AA seq
897 aa
AA seq
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MQKTMNLPCWLLPVLWGMSFGGSPSVQIGGLFPRGADQEYSAFRIGMVRFGTAEFRLTPH
IDNLEVANSFAITNCFCSQFSRGVYAIFGFYDKKSVNTITSFCETLHVSFITPSFPADGF
NQFVLQMRPDIKGPLISLVEYYKWETFAYLYDGDRGLSTLQAVLDTAAERKWQVTAINVG
NLKDERKDEAYRSLFQDLENKKEKRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANFG
FLDGDLSKIQYGGANVSGFQIVDFDDPIVAKFDQHWETLEEKEYPGADSRIRYTSALTYD
AVQVMTEAFKFLHKQRIDLTRRGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNVQF
DQYGKRVNYSVNVMELKNSGPVKIGYWNEVDKMAVTKSDSFSNDTMGIENKTVVVTTILE
APYVMLKKNSELFLENERYEGYCVDLAAEIAKHCGFKYALRIVGDGKYGARDAETKIWNG
MVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLA
YEIWMCIVFAYIGVSVVLFLVSRFSPYEWHIEELEDGQLGQSESTNEFGIFNSLWFSLGA
FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQS
EICYGTLDAGSTKEFFRRSKIALFDKMWQYMKSAEPSVFVKNTVEGVIRVRKSKGKYAYL
LESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKLNEQGLLDKLK
NKWWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAEAK
RLKMTFTDAMRSKARLSITGSMGENGRVLSPDFPKAVHSVPYIRPGMGMTLSMSDLS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagacgatgaatcttccgtgctggctattgcccgtactgtgggggatgtcgttt
ggtggatctccaagcgttcagattgggggtctgttccctcgaggcgcagatcaagaatac
agcgctttccggatcgggatggttcggttcggcacggccgagttccgactgacaccccac
atagacaacctggaggtggccaacagcttcgccatcaccaactgcttctgctctcagttt
tcccgcggggtgtatgccatttttgggttctacgacaagaagtcggtgaacaccatcaca
tcgttctgcgagacgctccacgtgtcgttcatcacgccaagcttccctgccgacggattc
aaccagtttgtgctgcagatgcgtccggacatcaagggcccgctcatcagtctcgtggag
tactacaagtgggagacgtttgcctatctgtatgatggtgacaggggtttgtcaacgctg
caggcagtcttggacacagcagcggagcgtaagtggcaggtgacggcgataaacgtgggc
aacctgaaggacgagaggaaagacgaggcttatcgctcgctcttccaggacctagagaac
aagaaggagaagagggtcatcttagactgtgaacaggacaaagtcaaagacatcatggag
caggttattacgatcggtcgtcatgtgaaaggctaccattacatcatcgctaattttggg
tttctggatggtgacttgtccaagatacagtatggtggagccaatgtgtcaggcttccag
attgttgactttgatgatccaatcgtggcgaagtttgatcagcactgggaaaccctggaa
gagaaagagtacccaggtgctgacagcaggatcaggtacacctctgcgctgacttacgat
gcggtgcaggtgatgacagaggccttcaagttcctgcacaagcagcgtatagacctcacc
cgccgcgggaacaacggagattgcctggccaaccctgcagtgccatgggcccagggggtg
gagatcgaacgagctctcaaacaggtccgtgtggatggactgactgggaatgtccagttt
gaccagtatgggaagagagtgaactactctgttaatgtgatggagctgaagaacagtgga
ccagtcaagatcggttactggaatgaggtcgacaaaatggccgtgaccaaatcagactca
ttctccaatgacactatgggcatagagaacaagactgttgtagtgacaaccattctggaa
gcaccatatgtgatgctaaaaaagaattctgagctatttctggaaaatgagcgctatgag
ggctattgtgtggacctggctgcggagattgcaaagcattgtgggtttaagtatgcgctg
aggattgtgggggatgggaagtacggtgcccgagatgctgagacaaagatctggaatgga
atggtgggagagttggtatatgggaaagcagacatagcggtggctcccctgaccatcaca
ctggtcagagaagaggtgatcgacttctccaagcccttcatgagtctgggcatctccatc
atgatcaagaagcctcagaagtcaaagccgggtgtattctccttcctggacccgctggcc
tatgagatctggatgtgcatcgtgttcgcctacatcggcgtgagcgtggtcctcttcctg
gtcagccgcttcagcccgtacgagtggcacatcgaggagctggaggacggacagctcggc
cagagcgagtccacaaacgagtttgggatctttaattctctctggttctctctgggtgcc
tttatgcagcagggatgcgatatttcgccaaggtctctttcagggcgtatagtgggtggt
gtgtggtggttcttcaccctcatcatcatctcctcctacacggccaacctggctgccttc
ctgacggtagagcgtatggtgtcccccatagagagtgctgaagacctggccaagcagtcg
gagatctgctacggaaccctggatgcgggatccaccaaagagttcttcaggaggtctaag
attgccctctttgataagatgtggcagtacatgaagagtgctgagccctctgtatttgtg
aaaaacacggtagagggggtcattcgggtcaggaaatccaaaggaaagtacgcctacctg
ctggagtccaccatgaacgagtacatcgagcagcggaagccgtgtgacaccatgaaggtc
ggggggaacctggactccaaaggatacggcatcgccacgcccaaaggatcagcattaaga
aatgcggtaaaccttgcagtgcttaaactcaatgaacaaggcctgttggacaaattgaaa
aacaaatggtggtacgacaaaggagagtgcggcagcgggggcggcgagtcaaaggagaag
accagcgccctgagcctgagtaacgtggccggggtcttctacatcctggtgggcggcctg
gggctggccatgctggtggccctggtggagttctgctacaagtcgcgcgccgaggccaag
agactgaagatgaccttcacagatgcgatgcgtagtaaagccaggctgtcaatcacgggc
agtatgggggagaatggaagggtgctgtcgccagatttccccaaagccgtccacagcgtc
ccatacatacggcctggcatgggaatgacactcagcatgagtgacctgtcctga
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