Clupea harengus (Atlantic herring): 105904460
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Entry
105904460 CDS
T09045
Symbol
tgfb1b
Name
(RefSeq) transforming growth factor beta-1 proprotein
KO
K13375
transforming growth factor beta-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04060
Cytokine-cytokine receptor interaction
char04068
FoxO signaling pathway
char04110
Cell cycle
char04148
Efferocytosis
char04218
Cellular senescence
char04350
TGF-beta signaling pathway
char04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105904460 (tgfb1b)
04350 TGF-beta signaling pathway
105904460 (tgfb1b)
04068 FoxO signaling pathway
105904460 (tgfb1b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105904460 (tgfb1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105904460 (tgfb1b)
09143 Cell growth and death
04110 Cell cycle
105904460 (tgfb1b)
04218 Cellular senescence
105904460 (tgfb1b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105904460 (tgfb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
char03110
]
105904460 (tgfb1b)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105904460 (tgfb1b)
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105904460 (tgfb1b)
Chaperones and folding catalysts [BR:
char03110
]
Intramolecular chaperones
Others
105904460 (tgfb1b)
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Transforming growth factors (RSTK binding)
105904460 (tgfb1b)
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Growth factors/receptors
105904460 (tgfb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Disaggr_repeat
Motif
Other DBs
NCBI-GeneID:
105904460
NCBI-ProteinID:
XP_012687801
Ensembl:
ENSCHAG00000016831
UniProt:
A0A6P3W367
LinkDB
All DBs
Position
8:23288619..23293042
Genome browser
AA seq
381 aa
AA seq
DB search
MRTQSLVLAGLCVLACVCHSGALSTCRPLDLELTRKKRIEAIRGQILSKLRLPKEPVLDK
KDEGDKVPSALLSVYNSTVQLGEEHTQHMRVPQPRDEDEGAYYAKEVHKFNMKQSENSTR
HQVLFNLAEMRSSLETDLLSQAELRLQIKNPVMANGTEQRLELYRGTGPQARYLGSRFVS
RDSADRWLSFDVTQTLREWLKGSEVEQGFQFKTHCDCGEKMKDFLFSISGMAKLRGDTGT
LSMYMQKPHILVMSLPVENQDDLPSRRKRQTSTAETCSEKSEKCCVRKLYIDFRKDLGWK
WIHEPAGYYANYCIGSCSYVWNTENKYSQVLSLYKHHNPGASAQPCCVPHVLDPLPILYY
VGRQHKVEQLSNMIVRTCKCS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcaaagtcttgtcctggctgggctctgtgtgctagcctgcgtctgccacagc
ggggccctatccacctgtcgacctctggacctggagctgacaaggaagaagcggattgaa
gccatccggggccagatactcagcaagctgaggctgccgaaggagccagtgctggacaag
aaggacgagggggacaaagtcccgtccgctctgctgtccgtctacaacagcaccgttcag
ctgggcgaggagcacacgcaacacatgagagtaccccagccccgagacgaggacgagggg
gcatattacgccaaagaggtgcacaagttcaacatgaaacagagtgagaacagcacgagg
catcaggtgctgtttaatctggcggagatgaggtccagtttggagacagacctgctctct
caggcagaactgcggcttcagatcaagaacccggtcatggccaacggcactgagcagagg
ctcgagctgtacagaggtactggcccacaggcccggtacctgggctcgcgattcgtgtcc
agagactcggctgaccgctggctttcttttgatgtgacacaaacacttagagagtggctt
aaaggatcagaagtggaacaaggattccagtttaagacacactgtgactgtggcgagaaa
atgaaggactttctcttctcgatttctggcatggccaaactaagaggtgacactgggact
ctctcaatgtatatgcaaaagcctcacatcttagtgatgtcacttcctgtggagaatcag
gatgacctgccttcccgtaggaagcgccaaacttcaactgctgaaacctgttcagaaaag
tcagagaaatgctgtgtaaggaaattgtacattgatttccgcaaagatcttggctggaaa
tggatacatgagcctgctggttactatgccaactactgcataggttcttgttcctatgtg
tggaacacagaaaataaatattctcaggtattgtccctgtacaagcaccataaccccgga
gcatctgcccagccctgctgtgtccctcatgtgctggacccccttcccattctctactat
gttggcagacaacacaaggtggagcaactatctaatatgattgtgcggacgtgcaaatgc
agctaa
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