Clupea harengus (Atlantic herring): 105904594
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Entry
105904594 CDS
T09045
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04020
Calcium signaling pathway
char04510
Focal adhesion
char04540
Gap junction
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105904594
04020 Calcium signaling pathway
105904594
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105904594
04540 Gap junction
105904594
09142 Cell motility
04810 Regulation of actin cytoskeleton
105904594
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105904594
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
char04090
]
105904594
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
105904594
Protein kinases [BR:
char01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
105904594
CD molecules [BR:
char04090
]
Proteins
105904594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
IMS_C
Haspin_kinase
RIFIN
Motif
Other DBs
NCBI-GeneID:
105904594
NCBI-ProteinID:
XP_031427228
Ensembl:
ENSCHAG00000008454
UniProt:
A0A6P8FFP4
LinkDB
All DBs
Position
8:complement(667993..682663)
Genome browser
AA seq
1112 aa
AA seq
DB search
MRSCWDSAFGVFFAVLLQLCPGGWSLETNPSNPEVILAPNSSLTVVCSGWTEVTWQTPHD
SNLELEGLEVDDQGTSSVLQLSNVTWMHTGLYVCEEPAARETKEISVFVPDPEVWFVSVG
SSLVMKEGEEGTIPCVVTDPRISVTLYEKTSQTPIQGRYRPSEGFTAALNDTSYICRGVL
DDQEKESRVFYVFSIVVPQSMDAFITASKTVVKEGEPLTVNCTVKGAEIVFFEWDYPREE
KTLEPLTDFLPSRDTLRSCLNIANATLQDSGNYVCRVNDTMEGHSAIDNITITVLQRGFV
RLDTDLPVNISAQLYENVELYVPIEAYPAPQVRWTKDNETLSGDSVTVDTKKVHGTSYVS
ILTLVRVRMEQNGLYKIHVSNEDDWKEVTFEVQVKAPPQITELSDIHMDEGHGVLCSAEG
VPTPTIYWYSCRSSQRCSNKTTPWKLLIPDPENIDIQTNVTEAGGRGKSRVRSVVTFQRM
DDITSVRCEARNDRGRRAWDIKLVSNSLSSQVAVMAAVLALVVIAVIFLIILIAVWRKKP
RYEIRWKVIESVSSDGHEYTYMDPMALPYDSVWEVPRDSLVLGHTLGSGAFGRVVEATAY
GLGPSQSTTKVAVKMLKSTARRSETQALISELKIMSHLGPHLNIVNLLGACTKRGPIYLI
TEYCRYGDLVDYLHRNKHTFLQYYTDKNRRDTEMCRENADSAGNTQGKSESDGGYMDMAK
EDSLEYVPMQELTDTIKYAEIEPSVYETPYQQENYQGQGQERSLAISDSPILSYMDLVGF
GFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDVMNDSNYISKGNTFLP
LKWMAPESIFQNCYTAMSDVWSFGILLWEIFTLGGTPYPDIPMNEQFYNALKKGYRMPRP
THATDEIYEIMCKCWNEKFEKRPPFSLLGHSLGSMLTDSYKKRYYQVNENFFKSDHPAVM
RRRPAQPDANYADTPELVGSGEEMTPAGSDTFSEYIVPIPDINAKAACELDDTASLSTSS
PQSPEDNTSTASVGFPEAIVVEVCPAPEEPAGHENATVPEEEQGPSPEQEPQDEEQIEEP
SLPDAPEESASPGQEGQQEEATCTPEIEESFL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctgctgggacagtgcttttggggtgttctttgcagtgttactgcagctctgc
ccggggggatggagccttgaaaccaaccccagtaacccagaggtcattctggcccctaac
tcctccctgaccgtggtgtgctccggctggactgaggtgacgtggcagacgccccacgac
tccaacctggaactggagggactggaggttgatgaccaggggacctccagcgtgctccag
ctgagcaacgtgacctggatgcacacagggctgtatgtgtgtgaggagcccgccgcacgg
gaaaccaaggagatctctgtgtttgtgccagaccctgaggtgtggtttgtctccgtgggg
tcatctctggtgatgaaggagggcgaggaaggcaccatcccctgcgtggtcacggatcct
cgcatcagtgtgaccctgtatgagaaaaccagccagacgcccatccagggacggtacagg
cccagcgagggcttcaccgctgccctcaacgacacctcctacatctgcagaggagtcctg
gatgaccaagagaaggagtcccgggtgttctacgttttcagcatcgtagttccacaaagc
atggatgcattcataactgcttcgaagaccgttgtgaaagaaggcgagccactgaccgtg
aactgcacggtgaaaggagcagagattgttttctttgagtgggactaccctcgagaggag
aaaacgcttgagccactgacggactttctgccaagtcgagacactctgcgctcctgccta
aacatcgccaatgccacacttcaggactccggcaactacgtgtgccgtgtcaatgatact
atggagggccattcagcaatagacaacatcaccatcactgtattacagagaggctttgtt
cgactggacacagatcttccggtgaacatctctgcccagctttatgagaacgtagagctc
tatgtgcccatcgaggcgtaccctgctcctcaggtgcgctggaccaaagacaacgagact
ctcagtggcgactctgtgacagtggacacgaagaaagtgcatggcaccagttatgtgagc
attttgactctagtaagggtcagaatggagcagaatggcctctacaaaatccatgtgtca
aatgaggatgattggaaggaagtgacctttgaagtgcaggtcaaggctccgcctcagatc
acagagctgtcagacatccacatggacgaaggccacggggtgctgtgttcagccgagggt
gtccccacgccgaccatctactggtacagctgtcggagctcacagagatgcagtaataaa
acgaccccttggaagcttctcatccccgaccctgaaaacatcgacatccagacgaatgtg
acggaggcggggggccgtggcaagagccgcgtgcgtagcgtggtgacgttccagcgcatg
gacgacatcacctcagtgcggtgtgaagcacgcaacgacagaggccgcagagcctgggac
atcaaactagtgtccaactctctttcttctcaagtggctgtgatggctgctgtgctagcc
ttggtggtcatcgcagtcattttcctcatcatcctaattgctgtttggagaaagaaacct
cgctatgagatccgatggaaggtgattgagtctgtgagttcagatggccatgagtatacc
tatatggaccctatggctctaccttatgattcagtttgggaagtacctcgcgacagcctt
gttttgggtcatactctagggtctggggcctttgggagggtggttgaggccactgcctat
ggcctgggcccctctcagtccaccactaaagtcgcagtgaagatgctgaagtctactgca
aggagaagtgagactcaggctctgatttctgaactcaagattatgagtcacttggggccc
cacctaaacattgtcaatctgctgggggcatgcacaaagcgaggtcctatctacctcata
actgagtactgtcgttatggtgacctggtggactaccttcaccgtaacaagcacaccttc
ctacagtactacaccgacaagaaccgcagggacaccgaaatgtgccgggaaaatgcagac
agtgcaggcaacactcagggcaaaagtgagtctgatggggggtacatggacatggccaag
gaggactcgttggaatatgtgcctatgcaagaactgactgatactatcaaatatgctgaa
attgaaccttctgtttatgaaacgccctaccaacaagaaaactaccagggacaaggccaa
gagaggtctctggcaatcagtgactctcctattctcagctacatggaccttgtgggcttt
ggattccaagtggccaaaggaatggaattcctggcatctaaaaattgtgttcatcgtgac
cttgctgccaggaatgtgctgatatgcgaagggaagcttgtgaagatctgtgactttggg
cttgcaagagacgtcatgaatgattccaactacatctcaaaaggcaacacgttcctgcct
ctgaagtggatggcaccagagagtatattccagaactgttacactgccatgagcgacgta
tggtcttttggcattctgttatgggaaatcttcaccctaggaggaacaccttaccctgac
atcccgatgaatgaacagttctacaatgccttaaagaaaggctacagaatgccccggccc
acacatgctactgatgaaatatatgagattatgtgcaagtgctggaatgagaagtttgaa
aaaagacccccattctctcttctgggacattctttgggaagcatgttaaccgacagctat
aagaagaggtactaccaggtgaacgaaaacttcttcaagagcgaccaccctgctgtgatg
cgcagaagaccggcacagcctgacgcaaactacgcagacactccagaacttgtggggagt
ggggaggagatgaccccggctggtagtgataccttcagtgaatacatcgtccctattcca
gacatcaacgccaaagcagcctgtgaactggacgatacagcctcgctaagcacctcaagc
ccccagagccctgaggacaacacaagcacagcgtcggtgggtttccctgaggcaattgtt
gtggaggtatgcccagccccagaggagccggccggccatgagaacgcaaccgttccagaa
gaggagcaaggtccctcgcccgaacaagaacctcaagatgaagaacaaattgaggaaccc
tctcttcctgacgctccagaggagtcggcgagcccggggcaagaggggcaacaggaggaa
gctacttgcacaccagaaattgaagaaagttttctgtaa
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integrated database retrieval system
