Clupea harengus (Atlantic herring): 105904695
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Entry
105904695 CDS
T09045
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04060
Cytokine-cytokine receptor interaction
char04150
mTOR signaling pathway
char04210
Apoptosis
char04217
Necroptosis
char04350
TGF-beta signaling pathway
char04620
Toll-like receptor signaling pathway
char04621
NOD-like receptor signaling pathway
char04622
RIG-I-like receptor signaling pathway
char04625
C-type lectin receptor signaling pathway
char04920
Adipocytokine signaling pathway
char05132
Salmonella infection
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105904695
04350 TGF-beta signaling pathway
105904695
04150 mTOR signaling pathway
105904695
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105904695
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105904695
04217 Necroptosis
105904695
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105904695
04621 NOD-like receptor signaling pathway
105904695
04622 RIG-I-like receptor signaling pathway
105904695
04625 C-type lectin receptor signaling pathway
105904695
09152 Endocrine system
04920 Adipocytokine signaling pathway
105904695
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105904695
09171 Infectious disease: bacterial
05132 Salmonella infection
105904695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105904695
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105904695
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Tumor necrosis fators
105904695
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Cytokines
105904695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
105904695
NCBI-ProteinID:
XP_031441860
Ensembl:
ENSCHAG00000019362
UniProt:
A0A6P8H3R4
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All DBs
Position
19:complement(7811147..7813622)
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AA seq
240 aa
AA seq
DB search
MAQDWKSADLEVCLEGAEPMEGLRKMGTSRPSTSWKICLSLLAIGLCAAAAITINNQKQD
TAVGSEDMRHTLRQISKQHKGSTAIHLEGEYNSTFSNTKVEWKDGQDQSFHAGGLKLVKN
EIVIPRKGVYFVYSQVSFRINCRVSPDQAQSLETIQLSHAVMRTSRAFDDKRPLLKTMRS
GCKQFISEEEDSGERWYSAINLGAVFSLEEGDQLYTLTESHLLPHVEGESGETFFGVFAL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggactggaagagcgctgatctggaggtttgtctggagggagctgaacccatg
gaggggctgaggaagatgggcacctcacggccatcaacgagctggaagatttgtttgtct
ctactggcgataggactgtgtgctgctgctgctatcactataaacaatcagaaacaagac
actgctgtcggaagtgaagatatgagacacactttgagacagatctcaaaacaacacaaa
gggagcacagccattcatttggaaggagagtacaactccacattctccaatactaaagtg
gaatggaaagacggccaggaccagtcttttcacgcgggggggctgaaactggtcaagaat
gagatcgtcatccccagaaaaggcgtgtacttcgtctacagccaggtgtccttccgcatc
aactgccgggttagcccagaccaggcccagtcgctggagacaatccaactgagccacgcg
gtcatgcgcacgtcccgtgcgttcgacgacaagaggccgctgctgaaaacgatgcgctca
ggctgcaagcaattcatttccgaggaggaggacagcggggagcgctggtacagtgccatc
aacctgggagccgtctttagcctggaggagggcgatcagctgtacaccctgaccgagtcc
cacctgctcccccacgtggagggagaaagtggggagaccttctttggagtgtttgctctc
taa
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