Clupea harengus (Atlantic herring): 105904974
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Entry
105904974 CDS
T09045
Name
(RefSeq) H-2 class II histocompatibility antigen, I-E beta chain-like
KO
K06752
MHC class II antigen
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04514
Cell adhesion molecules
char04672
Intestinal immune network for IgA production
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105904974
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105904974
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105904974
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105904974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105904974
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105904974
Exosomal proteins of epithelial cells
105904974
Exosomal proteins of breast milk
105904974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
C2-set_3
ETRAMP
DUF2627
DUF2113
Motif
Other DBs
NCBI-GeneID:
105904974
NCBI-ProteinID:
XP_031426014
Ensembl:
ENSCHAG00000002306
UniProt:
A0A6P8FJ67
LinkDB
All DBs
Position
7:2802259..2804692
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AA seq
254 aa
AA seq
DB search
MSSSQHLISGVIILSTLLGVDAFNGYYEYNVVQCRFSSGDLSDMEYIRSYWFNKAEYIRF
NSTVGKHVGYTAYGVYNAELKNNNSALLAQERGEKDRYCKGNAPTFINAILTKKVEPEVR
LTMGKASTGGHPAMLVCSAYDFYPKMIRVTWHRDGREVTGDVVSSEELADGDWYYQTHSH
LEFTPKAGEKISCVVEHASLREPLEITWDPSMPEPERNKIAIGAAALVLGLIVTAAGFIY
YKTKSRGRILVPSG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatcacaacatttgatttctggggtgatcattctctccactcttttgggagtg
gatgcatttaatggatattacgagtataatgtggttcagtgccgcttcagctccggggac
ctgagtgatatggagtacattaggtcttactggtttaacaaggctgaatacatacggttc
aacagcactgtggggaagcatgtgggatacactgcgtatggagtgtataatgcagagcta
aagaacaacaattcagcacttctggcacaggaacggggtgagaaggacagatactgcaaa
ggcaatgccccgactttcatcaatgccatactgacaaagaaagttgagccagaggtgaga
ctgactatggggaaggcctccactggtggtcatcctgccatgctggtgtgcagcgcgtac
gacttctacccaaagatgatccgtgtgacctggcacagagatggccgggaggtgaccggt
gatgtggtatctagtgaggagctggcggatggagactggtactaccagacccactcccac
ctggagttcacccccaaagctggagagaagatctcctgtgtggtggagcacgccagcctc
agggagcctctggagatcacctgggacccctccatgcctgaacctgagaggaataagatt
gccattggagctgcagcactggtgctggggttaatcgtcactgctgctgggttcatctac
tacaagacaaagtccagagggcggatcttggtacccagtggttag
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