Clupea harengus (Atlantic herring): 105904994 Help Entry 105904994         CDS       T09045                                  Name (RefSeq) msx2-interacting protein-like   KO K25100   Msx2-interacting protein Organism char  Clupea harengus (Atlantic herring) Pathway char04330   Notch signaling pathway Brite KEGG Orthology (KO) [BR:char00001]  09130 Environmental Information Processing   09132 Signal transduction    04330 Notch signaling pathway     105904994  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:char03036]     105904994 Chromosome and associated proteins [BR:char03036]  Eukaryotic type   Histone modification proteins    Other histone modification proteins     105904994 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RRM_1 SPOC MINT_MID RRM_5 RRM_7 Motif Other DBs NCBI-GeneID:  105904994 NCBI-ProteinID:  XP_012688423 Ensembl:  ENSCHAG00000001726 UniProt:  A0A6P3W377 LinkDB All DBs Position Unknown AA seq 3234 aa AA seqDB search MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDNPPSSSHARDVSGFSRAAVGPVYGPPV SLHGREGRYERRIDGSSDSRERAYEHSPYSHHERGAAFDRPRHYNTDYYRDRAMFSSAVG SGTAASAMASGFEAPEPHFETRMRDPFALSSGTRRDPYRDDRGRRVDRTYHHHRRSRSSH SSQSRHPSPQRTTGQTSKTPHSPKRAPVSPSRGPRSQSRSRSSSSDSVSSTSSTGSGSSD SNSSSSGGSRARSVQSAATHAPTAPPPLSIDGDEPRRSFGIRVQNLPVRSTDTSLKDGLF HEFKKYGKVTSVQIHGASEERYGLVFFRQQEDQEKALTVSKGKLFFGMMIEVTAWNGPET ESENEFRPLDGRIDEFHPKATRTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDIKRVNGVP QYAFVQYSDIASVCKAIKKMDGEYLGANRLKLGFGKSMPTTCVWLDGLSSNITEQYLNRH FCRYGLVVKVVFDRLKGMALVLYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFY RSMQASGQDIRDLYEIPTERREERRPPFHEFTAERAYYENVRTPGLYPEDPRREYPGRSR ERYSELEHYQGEHFDPRYHEDPREYRDYRDPFEQDMRKYTYIQRERERERERFEADRGRW SPSHQRRPITPSASPSPSERVPRETERRVYRHSSERSGSCSSLSPPPAPFEKPEKSPVEY KTEGLEREIEPVEKERVAGAERSRRGRRKDKGDKEKGERGKSRRGKMPSPVVSHSETDKE ASLDASSNKGKVSDTDVPEKSRYKGDDEPSPSEQVSRLEPQKGERLDAGKGDASDRDGKG RLKKHLKPDLGSEGKDLILESDRLAARKRRFGDPSGKTIRQKRSRLEDEGVQSPESGATS TLTKETEDVKALEKETQKREHLKPKLERGTSHYGLKEDQDSSSMSGMRGQGLCSVVRQGE PSDLDDLDSGKDLSGPSVSRGFSHDDNLDQENKGREEYISLDIDLSQSYRKQMEQRRLRQ QLQEPDKLGKPGSPQGLDAEDLEHRSLVHEVGKPPQDVTDNSPSSRNKKQDTFELDVSSK RERVYRSFRPKSEDSEWNNANSPKPQQSSQHPEEEIMDMPHLMTVKDVKELPKSEETVHP DLELAVKRVHTTQLAKLSTHLHGSVDDSQKRWESRLKQDLLPDLSFSGRKRLGHKNLEYG LWHDLEPGEVRSDSEEDREHKTNSPMPSTSLSLPERQRGDRLSDSKLSASLERNKFYSFA LDQTITPDTKALLERAKSLSSSREDNWSFLDYDSHFASLRSRKDTEKVESTPRPMPSWAM KKKKIRSESEDKLDDRKEEPKPEEHERRGLFASRFLHSSIFEQDSRRLQHLERKHEDSEQ GLGYQSTQQGAVEGQADSEPVVLFHSRFLELTRLQHQKGKDLKEPQQEAKRGEITDGSRM GKPQEEPQEQPQPVAHVVEPVLESETKPVSPVQLLPLPQMAQSAKEMSPPLEKNIVQSNS PKSSYLSVKEEENESEKTHVPPPQHVQEEELPSISPVLPEIRMTELKEPMSYEQHEPSIK SDMSEEQISSVESKPSEITETKVKTEPKPEPEVSHFPNYASPTPVEDMETMKHESSPIDD EPRVKQEIDHNSVDTFSVEEPVSPPQKSKNKKTKTSPTMPVTPLASPSSSDKQATRKSER IDREKLKRASSPRGEKTTPDSKSTSKSPVQGPDTEQVTEQRRRRRNVRSVYATPVEDEST TQAGKEVESPRAARKRGGDKEVAHSQQSDQDILAVPTTSRRGRPPKNRRQGEDASLLKSK IAETKEVEGIELGNSETVLKTTKGKHSPHPQKSQAPTSSTYSKKGDKLSDTNQQVDLSED INMLDSEPQSDLSPGERGKNTENPKQSTEEGQQKDDGVLTDGTTGIKTDNPTEAPVVDEL PQAEKSGKSKATRLIRNTKLPTEDKSLVLKNLRIRLDMTEVKAMLQSGEDDVEVEDLNKK AELSPKDQVMESSQEKEVVQSDKDEEPSDSKMTDPAENDLSREFELEQAVENIAKLTDGP SPQPFKSPRTERPSPVVPVPLPLPVPVEPEPPMEVEKPANPASETELAAAIDSITSEDLS CALPQEPAISTVMASEPAIQPFQRDSKVVEPSSSSAPIQEETSSTVSPRKGAKGRAKTQK KSKSQKPAASRKDSVKDSVAEPDNSSVQGSDPVSDTQTVTENPSATSIVITSPSKLNVSH LTDNVTEEPLHDEPTHGRSAGLVNKSQTILKPPQPYECTPLSPTSLCLKPTHKLPLSPTD RFSQSRDTPMVPAAQGENQTVSPGPETHDPDSSDLRKILMKPKNIPLSGTSTALGNMTSH PPRESVSPSEMVANKTSLPESRHSTLPAQPVVRSPGSLPSTETKQLFGEKTVISVIASTA TSVISRICNTPESEEKANIPRNNPYGEKQLPKQMFQTSIEESSTYHGATMGEEGGNAGRF VVESATVGTGPSPGLRVNTSEGVVVLSHSGQKMEGPQRISAKISQIPPASPADMESQQLV SMPQMKPDHYAQTPSAKCPLVPSDHGHSLKTQSSVSTKQENSLDKIETYQASGQSGVVKR LPQSGGSPQVMGYHHSDFSMLMKHPKKAEGAEPLSDGAKPSWASAISPAISPHLPSLAGN PVGFLPNTPADRAPTHLGGIKEPRSPRKSGHPHSPFTKVSSPIGSSSPKAMPSGLPPMSQ YVPNVHHSEQSVIMPPHSTHGSIGRMSPHRVGQTIPMGHLSQGDVRVNTPPLAMMNYGMH SDPLSSPWSGPPQQCPTSPQAVGGRDMVLKVNPGNTRAHEANDEETRRYQALGRPTATPL KPETLPQEYRGALHSGLPLDRYNIAQRDMRVLMHHQQGERPASELHHGPEPVPSSSSSTS ITASLSPRAHLLAKNVPERDALKSSEVNRPLSPVTKEGIIGIRGAMPAISSPQRIQLLAS GTSPAFQEYPAVYTNIRGVPSQFAENSPLNINQTPHIASSQAPQDPDRSQTPNEGKGEQV EHQSVNMVQLLTKYPIIWQGLIALKNDTAAVQLHFVYGNKALAVRSLPLQEGGALLRIVQ RMRLEASQLESVARRMTGDSEFCLLLAMPCGRDQDDVRSQTQFLRTSFINYLQAKLAAGI INIPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLSRISSICPQHLMIVITSV NT seq 9705 nt NT seq  +upstreamnt  +downstreamnt atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgttcgagaggag aaaattgttgagcattttaaacgctatggccgcgtggagagtgtcaaggtcctgcggaaa cgtggctcagagggtggggtggcggcctttgtggattttgtggacatcaaaagtgcacag aaggctcacaatgctgtcaacaagatgggggaccgggacctacgcactgattacaacgaa cccggctcagtgcccagtgctgtgcgagggctggaggacaaccccccctctagcagtcac gccagggacgtttcggggttctcacgggccgcggttggtcctgtttatgggccccccgtg tccctccacggcagagagggacgctatgaacgcagaatagacggcagctctgacagtcga gagcgtgcctatgaacatagtccctacagtcaccatgaacgcggggccgcctttgaccgg ccgcgccactacaacacagactattaccgtgaccgtgccatgtttagctcggctgtgggc tctggcaccgcagctagtgccatggccagtgggtttgaggcccctgagcctcactttgag acacgcatgcgtgacccctttgcactgtccagcggcacacgccgtgatccttaccgtgat gaccgggggcggcgagtagaccggacataccaccaccaccggcgcagccggtcttcacac tcctcacagtcacgccacccctcgccccagcggaccactggccagacctccaaaaccccc cactcccccaaacgagcccctgtctcccccagcagaggcccgcgctcacagtcacgctcc cgatcatccagctcggactctgtcagcagcaccagcagcacgggtagtggcagcagtgac tccaacagcagctccagtggggggtcacgagcacgctcagtgcagtcagccgccacacat gcacccacggcccctccccccctgtccatagacggtgacgagccacgcaggagttttggc attagggttcagaacctacctgtgcgctctacagacacgagtttgaaggacgggctcttc cacgagttcaagaagtacgggaaggtgacatctgttcagatccacggggcgtcggaggag cgatacggactagttttcttcaggcaacaggaggaccaggaaaaagcactcactgtctcc aaaggaaaactcttctttggcatgatgattgaggtcactgcctggaatggcccagagacc gagagtgagaatgaattccggcctctggatggaagaatcgatgaatttcatccaaaagcg acccgcactctttttattggaaatttggaaaagacaaccaactaccagcagctcttggac gtgtttcagcgctttggggagatagtggacattgacatcaaaagggttaatggcgttcct cagtatgcctttgttcagtactctgacattgcgagcgtctgtaaggctataaagaagatg gatggagagtaccttggagccaaccgcttaaagcttggtttcgggaagagtatgcccaca acatgtgtctggctggatggtttgtcctctaacatcacagagcagtacctgaacagacac ttctgtcgctatgggcttgtggtcaaggtagtgtttgacagattgaaaggaatggctctc gtcttgtacaacaatactgactttgcccaagcagctgttagagagaccaaaggttggaag attggtggcaacaaaattaaagttgattttgccagtcaagagagccaaatggccttctat cgctccatgcaagcttctgggcaggacattagggacttgtatgaaatcccaaccgagagg agagaagaacgcaggcctccttttcatgaattcacagcagagcgagcatactatgaaaat gtgcgtactccaggcctttaccctgaagatcctcgacgtgaataccctggcaggagccgg gaacgttactctgaactagagcactatcaaggtgaacactttgaccctcgctatcatgaa gatccccgggagtacagagattaccgtgacccatttgagcaggacatgcgcaagtacact tacattcagcgggaaagagagagagagcgtgagcgctttgaggctgaccgtggtcgatgg agcccttctcatcagagacgtcctataacccctagtgcttcaccatctccttctgagcgt gtcccaagagagactgagcgccgtgtttacaggcattcttcagagcgaagtgggagctgt agctcgctgtcccctccaccagcaccgtttgaaaagcctgagaagtccccagtggaatat aagactgagggtcttgaaagagaaattgagccagtggagaaggaacgtgttgcaggcgct gagagaagcaggcgggggagacgcaaggacaaaggagacaaggagaagggggagagaggc aagtcaagaagaggtaaaatgccatctcctgttgtctcacattcagagacggacaaagaa gcttctttggatgctagctcaaataaagggaaagtttcagacacggatgttcctgagaaa tcacgatacaagggtgatgatgagccttcaccttctgaacaggtgtcccgtctagagccc cagaaaggggagagacttgatgcaggaaagggagatgcatcagatagggatggaaaaggc agactgaaaaaacacctaaaacctgatcttggaagtgaagggaaagatttaattttggag tcagaccgtttagccgctcgtaaaaggcgctttggtgatcccagtggaaaaaccattcga cagaaaaggagtagattggaggatgagggtgtccagtccccagagtctggagcaacttca actcttactaaagagacagaagatgtgaaggcacttgaaaaagagacacagaagagggaa catttaaagcccaaactggagagggggacttctcattacggacttaaagaagaccaagac tcctcttccatgtctgggatgagagggcagggtctgtgttcagtggtacgacaaggtgaa ccatcagatcttgatgatcttgactctgggaaggatctgtctggtcctagtgtttctaga gggttctcacatgatgataatcttgatcaggaaaacaaaggcagggaagaatatatctct cttgacatagatctttcccagagctaccgtaagcaaatggaacaacgcagactacggcag cagctccaggagcctgataaacttggaaaaccaggcagtcctcagggtttggatgctgaa gacttggaacatcgcagtctagtgcatgaagtaggaaaaccacctcaggatgttacagac aattctccatcctctagaaacaagaagcaagacacttttgagttggatgtgagcagcaag agagagcgtgtatacaggagcttccggccaaagagtgaagattcagaatggaataacgca aactctccgaaaccacaacagtcctcccaacatcctgaagaagaaattatggacatgcca catcttatgactgtcaaagatgttaaagagcttccaaaatctgaagaaactgttcaccca gacttagaactagcagtcaaaagagtacacaccacacaattggctaagcttagcactcat ttacatggcagtgtagatgattcacagaaacgttgggagagtaggctgaagcaagattta ttacctgatctaagtttctcgggaagaaaacgactaggacacaagaatttggaatacggc ctttggcacgatttggagcctggggaggtacggtcagattctgaagaggatcgagagcac aaaacaaactctccaatgccctctacatctctttctcttccagagaggcaaagaggggac aggctgtctgactcaaagttatccgcctctctggaaagaaataaattctattcctttgca ctggaccagactattacaccagacaccaaagctcttcttgagagggcaaagtccttgtca tcttctagggaagacaactggtctttcttggattatgactcccatttcgctagtttacgc agtcggaaggatacagagaaggtggagtcaacaccacggccaatgccctcatgggccatg aagaaaaagaagattcgaagtgagtctgaggataagctagatgacaggaaggaggaacca aaaccagaggagcatgagcgaaggggactttttgcctctcgttttcttcacagttctatt tttgaacaagattcaagacgcctccagcaccttgaacgaaagcatgaggactctgaacaa ggtcttgggtaccagtccactcagcaaggtgcagtagagggacaagccgactctgaacca gttgtgctatttcatagcagattcttggagctgacacgattgcaacatcaaaaaggtaaa gatctcaaagaacctcagcaagaggccaagagaggagaaatcacagatggcagcagaatg ggtaagccacaagaagagccccaagaacagccacagccagttgctcatgttgttgaacca gttttagaatctgaaacgaaaccagttagccctgttcagctactccccttgccacagatg gcccagtcagctaaagagatgtcgcctccattggagaaaaatattgttcaaagtaattca cccaagtcttcttatctgtcagtgaaagaggaagaaaatgaatctgaaaagactcatgtg cctccaccccagcatgtgcaagaggaagagctgccctccatcagccctgtattacctgaa attcgaatgacagagttaaaagaaccaatgagctatgaacaacatgaaccatccatcaaa agtgacatgagtgaggagcaaatatctagtgttgaatccaagcctagtgaaataacagag actaaggttaagacagaacccaagcctgaacctgaagtttcacattttcccaactatgcc tccccaactcctgttgaagacatggagaccatgaaacatgaatctagtcccattgatgat gaaccacgagtcaaacaagagattgaccataattctgttgatactttttctgtggaggag ccagtctcaccaccacaaaaatcgaaaaataagaagacaaagacttctcccacaatgcct gtaactccgttggcatccccaagtagttctgacaaacaagccacacgtaagagtgagcga attgatagagagaagttgaaacgtgcctcttccccacgaggagaaaaaacaactcctgac tccaagtcgacaagtaaatctcctgtacagggccccgacacagagcaggtcaccgaacaa agacgaagacgaagaaacgtgcggtctgtgtatgccactccagttgaagatgagtctact acacaggctggtaaggaggtagagtcaccgcgtgcagctaggaaacgaggaggggacaaa gaagtagcacattcacaacagtcagaccaggacatacttgctgtaccaacaacctcaagg cgagggcgccctcctaagaatcggcgccagggagaagatgcatcacttctgaagtccaaa attgcagagacaaaagaggtagagggcatagaattggggaacagcgaaactgtcttgaaa actactaaaggtaaacattctccccacccacaaaaatcgcaggcacctacatctagcact tatagcaagaaaggggacaaactttctgacaccaaccagcaggtagatctttctgaggat attaatatgctagattctgaaccccagagtgatctttctccaggagaaagaggaaaaaac acagagaacccaaaacagagcacagaggaagggcaacaaaaagatgatggtgttcttact gatgggactactgggatcaaaactgacaaccccactgaggcccctgttgtggacgaactt cctcaagctgaaaagagtgggaagtctaaagctacaagattgattcgaaatactaaattg ccaactgaagacaagtcccttgttcttaagaatctacgaatcagacttgacatgactgag gtcaaagcaatgcttcaatctggtgaagatgatgttgaggtggaggatttgaacaaaaaa gcagaactttcacccaaagatcaagttatggaaagctctcaagaaaaagaagtcgtacaa agtgataaggatgaggaaccatcagactctaaaatgaccgacccagctgaaaacgattta tctcgagaattcgaacttgagcaagctgtagaaaacatagctaaactgactgatggtcct agccctcaaccattcaaaagtcccagaacagagcgacctagtccagtggttccggttcca cttccacttccagttccagtggaaccagagcctccgatggaggttgagaaacctgccaat cctgccagtgaaactgaacttgctgctgccattgattcaatcacatctgaagacctatcc tgcgcattgccgcaagagccagccatcagcactgttatggcgtcggaaccagcaatccag ccatttcaaagagattccaaggttgtagaacctagttccagcagtgctcctattcaggag gagacgagttccacagtgtctcctaggaaaggagctaaaggcagagctaaaacacaaaag aagtcgaaaagtcaaaagccagctgccagcagaaaggattcggttaaagacagtgtagca gaacctgacaactccagtgtccagggttcagatcctgtgtctgacacgcaaacagttaca gagaatccttctgcaacatccatagtcattacctccccttctaaattgaatgtgtcacat ctaacagacaatgttactgaagaaccacttcatgatgaacccacacatggaagatctgca ggccttgtgaataaaagtcaaactattcttaaaccaccacagccctatgagtgtactcct ctctccccaacatctttatgcctaaaacccacacacaagcttcctctctctccaacagac cgatttagtcagtccagggacaccccaatggtaccagcagctcaaggagaaaatcaaacc gtgtcccctggacctgaaacccatgaccctgactccagtgacttgcgcaaaattctaatg aagcctaaaaatatccctctgtcaggtactagcactgcactgggaaacatgacttcacac ccaccgagagagagtgtgtctccatcagagatggtagccaataagacttctttgccagaa agtcgacattcaactttgcctgctcaacctgttgtccggtcccctggctccctcccttca acagagaccaaacagctttttggtgagaaaactgtgatttctgtcattgcctccactgcc acctcagtcataagtcgtatctgtaacactcctgagtctgaggaaaaggcaaatatccca aggaataacccgtatggtgaaaaacaacttcccaagcaaatgtttcagaccagtatcgag gagagtagtacttaccatggagcaactatgggagaggaaggaggaaatgcaggacgtttt gtagttgaaagtgcaactgttggtacagggcccagtcctggcttgagggtgaacacttca gagggtgtggtggtgcttagtcactctggtcagaaaatggaaggaccacagaggattagt gcaaaaattagccagattccaccagctagccctgcggacatggagtctcagcagttggtt tccatgcctcagatgaaaccagatcattatgcccagacccctagtgccaagtgccctctt gttccatcagatcacgggcattcccttaagacacaatcaagtgtctccaccaaacaagaa aattccttggacaagattgaaacataccaagcaagtggtcagagtggggttgtgaaaagg ttgccgcaatctgggggcagtccacaggttatgggttaccatcactcagacttttctatg cttatgaagcatccaaagaaagcagaaggagcagaacctctcagtgatggggctaaaccc tcctgggcatctgctataagtccagccataagcccccaccttccctcgttggctggtaat cctgttgggttcttacccaacactcctgcagatagagctcccactcaccttggtggaatt aaagagcctcgttctcctcggaaatctggccaccctcattctccttttaccaaagtgtct tctcccatagggtcctcctctccaaaggccatgccctctggcttaccgcccatgtctcag tatgtcccaaatgtccatcactcagagcagtcagtcatcatgcctccacacagcacccat ggaagcataggtagaatgtcaccacaccgtgttggccagaccattccaatgggacatttg tctcaaggagatgttagagtgaacactccaccattggctatgatgaattatgggatgcat tctgatccactgtcatctccatggtcagggcctccccaacagtgcccaacatctcctcag gcagttggaggcagagatatggttctgaaggtcaatcctggcaatacaagggcacatgaa gcaaatgatgaagagacaagacgataccaggccttgggaagaccaacagccactcccctt aagccagaaaccttgccacaagaatatcgtggagctctacatagtggtctgccactagac cgctacaacattgcacagagggatatgcgtgtactcatgcatcaccagcagggggagcgc cctgcctcagagttgcaccatggtcctgaacctgttccctcttcatccagctccaccagc ataactgcttccttgtccccaagggctcacctactggcaaaaaatgtgcctgagagggac gccttgaaatcatcagaggttaacaggccactttcacctgtcactaaagagggaattatt ggcatccgtggagctatgcctgccatttcctcacctcaacgaattcaattactggcatca ggaacgagcccagcgttccaagagtacccggccgtgtataccaatattagaggtgtccct tcgcagtttgcagagaattcacctttgaacatcaaccagactccgcacattgcatcttca caggctcctcaagatccagaccgcagccaaacgccaaatgagggtaaaggggaacaggtg gaacaccagtctgtgaacatggtgcagcttttaacgaaatatcccatcatttggcaaggc ctaatagctctaaagaacgatactgctgcagtccagttacattttgtgtatggaaacaag gcccttgcagtgcggtctctacccttgcaggagggaggtgctctcttgcgcattgtccag agaatgagattggaggcatcacagctggagagtgtggctcgaaggatgactggtgacagt gagttctgcctgttgctggccatgccttgtgggcgtgaccaagacgatgtccggagccaa acccagttcctccgaacatctttcataaactacctgcaggccaagctggctgcaggaatc atcaacatcccaaacccaggctccaatcagccagcctacgtgctacagatctttccgcca tgtgagttctcggagagccatctttcacggcttgcaccagacctcctgagtagaatctcc agtatctgtccacagcacctcatgatcgtcatcacctctgtgtga

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