Clupea harengus (Atlantic herring): 105905127
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Entry
105905127 CDS
T09045
Symbol
rxylt1
Name
(RefSeq) ribitol-5-phosphate xylosyltransferase 1
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00515
Mannose type O-glycan biosynthesis
char01100
Metabolic pathways
Module
char_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
105905127 (rxylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105905127 (rxylt1)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
105905127 (rxylt1)
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105905127 (rxylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RXYLT1_C
RXYLT1_N
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
105905127
NCBI-ProteinID:
XP_031420376
Ensembl:
ENSCHAG00000025771
UniProt:
A0A6P8F8T6
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All DBs
Position
3:9820156..9824357
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AA seq
443 aa
AA seq
DB search
MMRVLRRKIVALVVAAYVAFSLYAAYNVFFSKRIMSRVHRVVKKVSAGDAKLDPKHAQAP
STVEKEWNPWEEELAKEINIQQKRGDAFKGQLGLIAKSRTKRYKVQIWGKAAIGLYLWEH
ILEGPLNPTDKTGQWREGEILSGKINFSFYTGPAVVQGHIPVDTDSVVLVLNGREQQKIS
YSTQWLQHAHALVQAHTVTHVAVVLLGSEQCTNDWISPYLRRHGGFVDVLFLVYDSPWVN
DKDVFQWPLGVATYRHFPVVMPTAQLVSTNRPYLCNFLGTVYKNSSREILMNILKQDNLE
KECITNAREKWLPQETAESLRQYQSALAQSELTLCPVGVNAECYRIYEACAYGSLPVVED
IQTKGRCTEGRSSPLRLLKEAGAPFIFVKDWKELPAILQSERGMSQAQREERRRRLLEWY
SGFRQQMKERFTEVLEDAFFKVS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagttcttcgtcgaaaaatcgtggctctcgttgtagctgcatatgtcgctttt
tcattgtatgcggcatataatgtattcttcagtaagaggattatgtctcgcgtccacaga
gtggtgaaaaaggtttctgctggcgatgctaaacttgaccctaagcatgcacaggctcca
tccacagtggaaaaggagtggaatccttgggaggaggagttggcaaaagaaatcaacatc
cagcagaaacgcggagatgccttcaaggggcagttaggattgatcgccaaaagcagaacc
aagagatacaaagtacagatctggggcaaagcagccatagggctgtatttatgggagcat
atcttagaaggtcctctgaaccctactgataaaacaggccagtggagagaaggagagatc
ctgtcgggaaaaatcaatttcagcttttatactggacctgctgtggttcaggggcacatt
cctgtggacacagacagtgtggtactggttttaaatggccgtgagcagcagaagatctcc
tactctactcagtggttgcagcatgcacacgccctggtacaagcccacaccgtgacccat
gtggctgtggtcctgctgggaagcgagcagtgcaccaatgactggatcagtccttacctc
agacgtcatggcggttttgtcgatgtgctcttcctggtgtatgacagcccgtgggtcaat
gacaaggatgtgtttcaatggcccttaggagtggcaacgtacagacacttccctgtcgtt
atgccaaccgcacagctggtgagcaccaatagaccgtacctctgcaattttctgggcaca
gtctacaagaactcttctcgagagatccttatgaacatcctgaaacaggataacctggag
aaggagtgcatcaccaatgctcgagagaagtggttaccccaggagaccgcagagtccctc
cgtcagtaccagtcagcgttggcgcagagtgagctcaccctgtgcccggtgggtgtgaat
gccgagtgctaccgcatctacgaggcctgtgcgtacggctcactgcccgtggtggaggac
attcagaccaaaggcagatgcacggagggacgcagctcccccctccggctcctcaaggaa
gccggtgcccccttcatcttcgtgaaggactggaaggagctgccggccatcctgcagagc
gagaggggcatgagccaggcacagagagaggagaggaggaggaggctgctggagtggtac
agtggcttcaggcaacagatgaaggagcgcttcactgaggtgctggaagacgccttcttt
aaagtcagctga
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