Clupea harengus (Atlantic herring): 105905820
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Entry
105905820 CDS
T09045
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04060
Cytokine-cytokine receptor interaction
char04672
Intestinal immune network for IgA production
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105905820 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105905820 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105905820 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105905820 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105905820 (cxcl12b)
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Chemokines
105905820 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Chemokines
105905820 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
105905820
NCBI-ProteinID:
XP_012689326
Ensembl:
ENSCHAG00000006068
UniProt:
A0A6P3W603
LinkDB
All DBs
Position
26:4871528..4880702
Genome browser
AA seq
100 aa
AA seq
DB search
MDLKLLAMVALLTIALHTSSSAAKPISLVERCWCRSTLNTVPQRSIREIKFLHTPNCPFQ
VIAKLKNSDREVCINPKTKWLQQYLRNAINKIKKSRKRSN
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaacttctggcgatggtcgccctgcttaccatagctctgcacacatcaagc
tctgccgccaagcccatcagtctggtggagcgctgctggtgccgttccacgctgaacacc
gtgccccagcgcagcatccgcgagatcaagttcctccacacgcccaactgccccttccaa
gtcattgccaagctcaagaacagcgaccgtgaggtctgcatcaaccccaagaccaaatgg
ctccagcagtatctgaggaatgccattaacaagattaagaagtcaagaaaacgttcaaat
taa
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