Clupea harengus (Atlantic herring): 105905896
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Entry
105905896 CDS
T09045
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105905896 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105905896 (trpm2)
Enzymes [BR:
char01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
105905896 (trpm2)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105905896 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
DUF4760
Motif
Other DBs
NCBI-GeneID:
105905896
NCBI-ProteinID:
XP_031442375
UniProt:
A0A6P8H520
LinkDB
All DBs
Position
2:21067993..21086463
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AA seq
1460 aa
AA seq
DB search
MLMKTLKTNFKKKMLCKSEKIHPDEPDIWQLGQIGVSNLLSNLRRCSLKSWIKENIKKKE
CCFFVQTEREGICKCGYPKDHHVEEANNPERFLGQSWEGQSHVIEVPTDAFGDIHFGGLA
QNTGKYVRVSSDTPSEVLYQLMTEHWKLRPPNLLISVTGGAKNFYMRTELKNKFRRGLIK
VAQSTGAWIITGGTHAGVMKHVGMAVRDYTLSSSSVKGEIVAIGVATWGTVHKRKSLIHP
EGCFPADYTLDEQTQGHLSCLDSNHSHFLLVDDGTHDRYGVEIGLRSRLEKLIAEQSLGN
RESHVKIPVVCVVLDGGQGTLNTIYNAMLNSTPCVILEGSGRMADVIANVAGKPVSRVTL
ALIQRLMKRFFGQEYESFSEIKVIEWAKKIQDIIRMPHLLTVFSMDEDKNSDVDVAILQA
FLKASRNEESVGQQSWERQLELAVAWNRVDIAESEIFTEESKWKSSDLHDAMFSALVGHK
SEFVRLLLENGVSIPQFLDKKGKMLCELYTNMPSCFFLRKLVKRLQGDKRHSQTNHRKNI
SLGAVGEVLRQLLGSFTQLIYLPTQSHDLIKIAEEDPDNTVIRDPGRDFFLWAILQNNRE
LAQIAWEQCRDSTAAALAASKILKKLAQESDDDEDDANMRELANHYERQAIGVFSECHSW
DDQRAQRLLIRISPSWGKTTCLRLALEANDKSFVAQSGVQALLTQIWCGELAVDTPQWKL
VLCMLFSPLIYTGFITYRRNEDIEREAMRNEELLAMESVTGSSTNTRMKTSFRDPQDGAQ
LKPLSCLTKLASFYAAPQVKFFWNIASYFGFLWLFSIVLMIDFQPTPSWREWLLYVWLTS
LVFEEVRQLFDDPDGFGFRRKANLYINDLWNILDVVSILLFIAGLACRWTSSAFYAGKVI
LCIDFIIFCLRLMAIFTISRTLGPKIIIVKKMMMDLFFFMFLLSIWVVAYGVAKQGILIH
NEERLDWIVRGAVYEPYLIIFGNVPTNIDNAEFDVSTCTVNGTDPMRPKCPVLNANHMPA
FPEWLTIIMLCVYLLFANILLLNLLIAIFNYTFQEVQDNTDTIWKFQRYELIKEYHSRPA
APPPFILLSHLLLLFRRLVMRSSPQKHKQFREQLSKTEEEELLSWETFMKDNYVATQRQE
KSESTERRIQDTADRVGSMSELLEREQDRGSVAKRLVHLEEQISQSTKALKWIMDTLKAQ
GYKSKEEPPSMSKSAESEADEDEIDGEPEKRQYHFYARSYLYPGTNKKRFPVPEEKVPWE
VDFTPYIAEVYSADTVNKAEELTLDNYRNPGGRTGIRGKGALQCLGPNHILDPVLTHWQD
KDHSVLQFLAAWNEAERCWSLPGGALKTGEPLPDRLKTLLGDKLYQRIKAKLGDGSRHNT
VYEGYADEPRNTDNAWIETAVLNIHLDSAGSLMNELNRKVATSQMSNERIQWKEVNSKTS
VYTYQKEALRLIAKLHQTPF
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgaaaaccctcaagaccaacttcaagaaaaaaatgctgtgtaaatcagaaaaa
atccacccagatgagccagacatctggcaacttggacagattggagtaagcaatctccta
tcaaacctcaggcgctgctcactcaagtcctggattaaggagaacatcaagaagaaggag
tgctgcttcttcgtgcagacagagagagagggcatttgtaaatgtggctacccaaaagac
caccatgtggaggaggccaataatccagagaggtttctgggacagtcttgggagggccag
agtcatgttattgaggtgcccaccgacgcctttggggatattcactttgggggccttgcc
caaaacacaggcaagtatgtgcgtgtgtcatcggacaccccctctgaggtcctgtaccaa
ctcatgacagagcactggaagctccgccccccgaacctgctcatctcagtgacgggcggg
gccaagaacttctacatgaggacggaactgaagaacaagttccgcaggggtctcatcaaa
gtcgcacaaagtacaggcgcctggatcatcactggaggcacccatgccggggtgatgaag
catgtggggatggctgtacgtgactacaccctcagcagcagctcagtcaagggggagatc
gtggccattggggtggccacctggggcaccgtacacaaacgcaagtccctcatacaccct
gagggctgtttccctgccgactacacgctggatgagcagacccagggccacctctcctgc
ctggacagcaaccactcccacttcctgctggtggatgacggcacgcatgaccgttatggc
gtggagatcggcctgcgcagccgccttgagaaactcatagcagaacagtcactagggaac
agagaaagtcatgtgaagatccctgtggtgtgtgtggtgttggatggaggacagggcact
ctgaacaccatctacaatgccatgctgaacagcacgccgtgtgtgattctggagggctcg
ggccggatggcggacgtgatcgctaatgtggctgggaagcctgtgtcacgggtcaccctg
gctctgatccagaggctgatgaagaggttcttcggacaggagtacgaaagcttctccgag
atcaaggtcatcgagtgggccaagaagatccaggacataatcaggatgccgcaccttctg
accgtgttcagcatggacgaagacaagaacagcgacgtggacgtggccattctccaggcc
tttctgaaagcctctaggaatgaggagagtgtggggcagcagagctgggagaggcagctg
gagctggccgtggcatggaaccgcgtggacatcgcagagagcgagatcttcactgaggag
agcaagtggaagtccagtgatctgcacgacgccatgttctcggccctggtgggccacaaa
tcagagtttgtgcgcctgcttctggagaacggcgtgagcatccctcagttcctggacaag
aagggcaagatgctgtgcgagctctacaccaacatgcccagctgcttcttcctgcgcaag
ctggtaaagcggctacagggcgacaagcgccacagccagacgaaccaccgcaagaacata
tccctcggcgccgtgggagaggtcttgcgccagctgctgggcagcttcacccagctcatc
tacttgcctacgcaatcacacgacctcatcaagattgcagaggaggaccccgacaacact
gtgattcgagaccctgggagagatttcttcctctgggccattctgcagaataacagagaa
ctggcccagatcgcctgggaacagtgccgagacagcacagctgctgctttggcagccagc
aagattctaaagaagctggcgcaggagtcagatgacgatgaagatgatgccaatatgaga
gaacttgccaaccactatgagagacaggccattggtgtgttcagtgagtgccatagctgg
gatgaccagcgagcccagagacttctgatccgtatctcgccgtcttggggcaaaaccacg
tgtctgcgtttggcactggaggcgaacgataagagctttgtggcacagtcaggggttcag
gctctcctgacccaaatctggtgtggggagttagctgtggacaccccccagtggaagctg
gtcctctgtatgctgttttccccactcatctacactggtttcataacctataggcgtaat
gaagatattgagagagaagccatgagaaatgaggagttgctggctatggagtctgtgaca
ggaagctcaaccaataccaggatgaagacttcattccgtgatccccaggacggcgctcag
ctgaagcctctgtcctgcttaaccaagctggcgagcttctacgcggctcctcaggtgaag
ttcttctggaatatcgcctcctactttgggttcctctggctgttctccatcgtgttgatg
atcgacttccagcccacgccgtcatggagggagtggctgctgtacgtctggttgacttct
ttggtgtttgaggaagtcaggcagcttttcgatgatccggatggatttgggttccgaagg
aaagccaatttatatattaatgacttgtggaacattctagatgtggtttccatcctgctc
ttcatcgctggtcttgcctgcaggtggaccagcagtgcgttttatgcgggaaaggtcatc
ctctgcatcgatttcatcatcttctgtctgcggctgatggccatcttcaccatcagcaga
accctgggcccaaaaatcatcattgtcaaaaagatgatgatggaccttttcttcttcatg
ttcctgctcagtatctgggtggtggcctacggggtggctaaacagggcattctgatccac
aacgaggagagactggactggatcgtcagaggggctgtgtatgagccttacctcatcata
ttcggcaatgtcccaaccaacatcgacaatgctgaatttgacgtgtccacctgcactgtt
aatggcaccgaccctatgcgacccaaatgccctgtgctcaatgccaaccacatgccagcc
ttcccagagtggctgaccatcattatgctctgtgtttaccttctctttgccaatatcctg
ctcctcaacctcctcattgccatcttcaactacacatttcaggaggtacaggacaacaca
gacacaatctggaagttccagaggtatgagctgattaaggagtaccacagccggcctgcc
gcccccccacccttcatcctcctcagtcacctcctcctcctgttcaggcgcctcgtgatg
cgcagctccccccagaagcacaagcagttcagggaacagttgtccaaaactgaggaggag
gagttgttgtcatgggagactttcatgaaggacaattacgtcgccacccagcgacaagag
aagagtgaaagtacggaacgccgtatccaggacacagctgatagggttggctcgatgtca
gagctgctggagagagagcaggacaggggctcggtggcaaagcgcctggttcatctggag
gaacagatctcccagtccactaaagcgctgaaatggattatggacaccttaaaagcccaa
ggttacaagtctaaagaggaacctccttccatgtccaagagcgctgagagtgaagcagat
gaggatgaaattgatggagaaccggagaagagacagtaccacttctacgcccgtagttac
ctctacccgggcaccaataagaagcgcttccctgttcctgaggaaaaagtgccttgggag
gttgacttcaccccttacatagctgaagtctacagtgcagatacagtcaacaaagcagag
gagttgaccttagacaactacaggaatccaggggggcgcacagggataagggggaaagga
gcactacagtgcttgggcccaaatcacatccttgaccctgttctcactcactggcaagac
aaggaccattcagttctgcagttcctagctgcctggaatgaggccgaaagatgttggtct
ttgccagggggtgctttaaaaacaggggagcccctcccagacaggctcaaaacactcctt
ggggataagctgtatcagagaatcaaagccaaactgggagatggaagccgacataacacg
gtatatgagggttatgctgatgagcccaggaatactgacaatgcttggattgaaaccgct
gttctcaacattcacttggacagtgctgggtccctcatgaatgaactaaaccgcaaggta
gccacaagtcaaatgtcaaatgagcggattcagtggaaggaagtcaacagcaagacgtca
gtgtacacataccaaaaagaagctctccgattaattgccaagctccaccagactccgttc
tga
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