Clupea harengus (Atlantic herring): 105906440
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Entry
105906440 CDS
T09045
Symbol
ap4b1
Name
(RefSeq) AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105906440 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105906440 (ap4b1)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Others
AP-4 complex
105906440 (ap4b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
B2-adapt-app_C
HEAT
PDS5
Motif
Other DBs
NCBI-GeneID:
105906440
NCBI-ProteinID:
XP_031422400
Ensembl:
ENSCHAG00000026009
UniProt:
A0A6P8FFJ7
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All DBs
Position
4:18120022..18130418
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AA seq
737 aa
AA seq
DB search
MPYLSTEETVKELKRALSNPNIQSDRLRYRNYIMRVIRSMTQGLDVSALFMDMVKASATV
DIVQKKLVYLYMCTYASLKPDLALLAINTLRKDCADPNPMVRGLALRNMCNFRMPGMTEY
IHQPILTGLKDKASYVRRVAVLGCAKMQSLQPNAEIDATIVNELYGLLRDPDPVVMVNCL
RALEEILKHEGGVVINKPIAHHLLNRLKELDSWAQGEVLTFLLRYKPRGEDELFDMLSLL
DGLLHSSHAPVMAATLRLFLQLAAPHPAVQADALEQARGPLLATCGSQSRELRFAGLCHV
QQVLRSQPAQFGVHYKRFFCGYSEPAYIKFRKMEILVELVNDENVGLVLEELRGYCTDVS
PELAQAAIAAIGRIGRTYSEKCLDILTGLLGLKQEHITSAVVQTFRDLVWLCPQSTATVC
QAVEGCEESLQDSEGKQALLWLLGMHGGQISNAPYVLESHIDGLKTEMSSVVKLELLTAA
VRLFLLRPAETQDMLGRLLHYCIEEESDMNVHDRALFCYRLLECGLEETRRVFQGPKSDP
CMGVLTGCPQEPINSWASKFNTLWLLGASEVVPASSDTAASDQPAHSSQGDALAEAVDEQ
LSIPEEGQQSPDLSLGAPLSHEAFERHWLELCVTHREALGFQGPPSASESLQAALQLVKI
QTLAFSRESTTPWKAYLYTHGSGTLILAELLQDESEAGNSSTGLVVSLKQLPENKMAIQE
FVSVLRTVLQTLTKDGS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgccttacttaagcacagaagagactgtgaaggagctgaagagggctctctccaacccc
aacattcagtctgaccgactccgctacaggaactacatcatgcgtgtaatcagatcaatg
acacagggcctggatgtctccgctctcttcatggacatggtgaaggccagtgccacggtg
gacattgtccagaagaaactggtctacctgtacatgtgcacctacgccagcctcaaacca
gacttggctctgctggccatcaacacgctccgcaaggactgcgccgatcccaaccccatg
gtgcgaggcctggccttgaggaacatgtgcaacttcaggatgccaggaatgactgaatac
atacaccagcctatcctgacaggactcaaggacaaagcttcctatgtgaggagagtggct
gtgctcggctgtgctaagatgcagagtctacagcccaatgctgaaattgatgccactatt
gtgaatgaactgtacggcctgctgagggatcctgaccctgtggtgatggtgaactgcctc
cgtgcacttgaggagatcctcaagcacgagggcggtgtggtcatcaacaaacccatcgcc
caccacctcctcaacagactaaaggagctggatagttgggctcagggcgaggtcctcacc
ttcctgctgcgctacaagcctcggggcgaagacgagctcttcgacatgctcagcctgctg
gacgggctgctgcacagcagccacgcccccgtcatggctgccacgctccggctcttcctg
cagctggctgccccccatccagcggtgcaggccgacgccctggagcaggcgagaggcccc
ctactggccacgtgtggttcacagtcccgggaactacgctttgctggtctgtgccatgtc
caacaggtgctgagaagccagccggcccagtttggggtgcactacaagcgcttcttctgt
ggctactcggagccagcctacatcaagttccgcaagatggagatcctggtggagctggtg
aacgacgagaatgtggggctggtgctggaggagctgaggggctactgcacagacgtgtcc
ccggagctcgcccaggccgccatcgctgccataggccgcattgggcgaacatacagcgag
aaatgtctggacatcctcacaggacttttggggttgaaacaagagcacatcacgtctgcg
gtggtgcagactttcagggacctggtgtggctttgtccccagagcacagctactgtgtgc
caggccgttgagggttgtgaggagagcctgcaggatagcgaggggaaacaagctttgctc
tggcttctgggtatgcatggaggccagatcagcaatgccccatacgtgctcgagagccac
attgacggactgaagactgaaatgtcctctgtggtcaagctggagctcttgaccgccgct
gtgcgtctgtttctcctgcgaccagctgagacgcaggacatgctcggacgtttgttgcac
tactgcatagaagaggagagtgacatgaacgttcacgaccgtgcccttttctgctaccgc
ctgttagagtgtgggttggaggagactcgacgggtgtttcagggtcctaagtcagacccc
tgcatgggagtactcacgggctgtccgcaggagcccatcaacagctgggcctcaaagttc
aatacgctctggcttctgggtgctagcgaagttgtcccagcatcttctgacacggccgct
tctgaccagccggcccacagttcccagggggatgccttggcagaggctgtagatgaacaa
ttgtccatcccagaggagggacagcagtccccagatctatccctgggggccccgctatca
catgaggcttttgagagacactggctggagctctgtgtcacccacagagaggcactgggc
ttccaggggcccccctccgcttcggagagcctccaggctgccctgcagctagtcaagatt
cagactctggccttcagtagggaaagcacaacaccctggaaagcctacctgtacacccat
ggctcgggaactttaatcctggcagagctgctgcaagatgagtccgaggcgggaaacagc
agcaccggtcttgtggtgtccttaaaacagctgcctgaaaataagatggctattcaagaa
tttgtttcagtgctgaggactgtgctgcagactctaaccaaagacggttcttga
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