Clupea harengus (Atlantic herring): 105906540
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Entry
105906540 CDS
T09045
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
char04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105906540 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
105906540 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105906540 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105906540 (nr1h3)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105906540 (nr1h3)
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
105906540 (nr1h3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
105906540
NCBI-ProteinID:
XP_012690164
Ensembl:
ENSCHAG00000024937
UniProt:
A0A6P3W5J9
LinkDB
All DBs
Position
6
Genome browser
AA seq
444 aa
AA seq
DB search
MSTLTTTDVTDVGHGDGKVFDGDDKLQLDCLGEESLSTEMKHEGQLHAGELAGPLLMDPS
DIKGDPAGDTTPPTTEGPPTKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFF
RRSVIKGAQYACKNSDRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKKQ
HEDDPARTSTVVTPNPTPEVPPLAPEQQEMIEKLVAMQKQCNKRSFLERPKVTPWPQSQD
PLNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETS
RRYDPALESITFLKDFSYNKDDFAKAGLQFEFINPIFEFSKGMNDLHLDEAEYALLIAIN
IFSADRPNVQDHDLVERLQQPYVDLLHSYIRIKRPMDHLMFPRMLMKLVSLRTLSSVHSE
QVFALRLQDKKLPPLLSEIWDVHE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccttactacgactgatgtcacagatgttggtcacggggacggtaaggtgttt
gatggagatgacaaactgcagcttgactgtctgggggaggagagcctctccacggaaatg
aagcacgagggccagttgcacgctggggagctggccggaccgctgctgatggaccccagt
gacatcaaaggggaccctgcgggggacacaacaccgcctaccacagaggggcccccgacg
aagaggaagaagggcccggcgccaaagatgctggggaacgaagtgtgcagcgtgtgcggc
gacaaggcctccgggttccactacaacgtgctgagctgcgagggctgcaagggcttcttc
cgccgcagcgtgatcaaaggcgcgcagtacgcctgcaagaacagcgaccgctgcgaaatg
gacatgtacatgcgccgcaagtgccagcagtgccgcctgcgcaagtgtcgcgaagctggc
atgcttgagcagtgcgttctctctgaggaacagatccggctgaagaaaatgaagaaacag
catgaggatgacccagcgcgaacttccacagtggtcaccccgaaccccacacctgaggtg
ccccctctggcccccgagcagcaagagatgatcgagaagctggtcgccatgcagaagcaa
tgcaacaagcgttcgttccttgaacgccccaaagtcactccttggcctcagagtcaagat
cctcttaatcgggaagtgcggcaacagcgctttgcccacttcacagagctggccatcatg
tctgtgcaggagatagtggactttgccaagcagctgccaggatttctggagcttacccga
gaggaccagattgccttgctcaagacttcaacaattgagatcatgctgctagagacatct
cggagatacgaccctgcccttgagagcatcaccttccttaaggacttcagctacaacaag
gacgactttgccaaagcaggtctacagtttgaattcatcaaccctattttcgagttctcc
aagggaatgaatgatctgcacctggatgaagcagaatatgctctactcattgctatcaac
atcttctctgcagaccggcccaatgtgcaggaccacgatttagtggagaggctacagcag
ccatatgtagacttgcttcattcatacatcaggattaagagaccaatggaccacctgatg
ttcccgcgcatgttgatgaagctggtgagcctgcgcacgctcagcagtgtccactcggag
caggtgtttgcactgcgcctccaggacaagaagctgccaccgctgctctccgagatctgg
gacgtccacgaatga
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