KEGG   Clupea harengus (Atlantic herring): 105906540
Entry
105906540         CDS       T09045                                 
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
  KO
K08536  liver X receptor alpha
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03320  PPAR signaling pathway
char04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    105906540 (nr1h3)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    105906540 (nr1h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:char03000]
    105906540 (nr1h3)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:char03310]
    105906540 (nr1h3)
Transcription factors [BR:char03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    105906540 (nr1h3)
Nuclear receptors [BR:char03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   105906540 (nr1h3)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 105906540
NCBI-ProteinID: XP_012690164
Ensembl: ENSCHAG00000024937
UniProt: A0A6P3W5J9
LinkDB
Position
6
AA seq 444 aa
MSTLTTTDVTDVGHGDGKVFDGDDKLQLDCLGEESLSTEMKHEGQLHAGELAGPLLMDPS
DIKGDPAGDTTPPTTEGPPTKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFF
RRSVIKGAQYACKNSDRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKKQ
HEDDPARTSTVVTPNPTPEVPPLAPEQQEMIEKLVAMQKQCNKRSFLERPKVTPWPQSQD
PLNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETS
RRYDPALESITFLKDFSYNKDDFAKAGLQFEFINPIFEFSKGMNDLHLDEAEYALLIAIN
IFSADRPNVQDHDLVERLQQPYVDLLHSYIRIKRPMDHLMFPRMLMKLVSLRTLSSVHSE
QVFALRLQDKKLPPLLSEIWDVHE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtccacccttactacgactgatgtcacagatgttggtcacggggacggtaaggtgttt
gatggagatgacaaactgcagcttgactgtctgggggaggagagcctctccacggaaatg
aagcacgagggccagttgcacgctggggagctggccggaccgctgctgatggaccccagt
gacatcaaaggggaccctgcgggggacacaacaccgcctaccacagaggggcccccgacg
aagaggaagaagggcccggcgccaaagatgctggggaacgaagtgtgcagcgtgtgcggc
gacaaggcctccgggttccactacaacgtgctgagctgcgagggctgcaagggcttcttc
cgccgcagcgtgatcaaaggcgcgcagtacgcctgcaagaacagcgaccgctgcgaaatg
gacatgtacatgcgccgcaagtgccagcagtgccgcctgcgcaagtgtcgcgaagctggc
atgcttgagcagtgcgttctctctgaggaacagatccggctgaagaaaatgaagaaacag
catgaggatgacccagcgcgaacttccacagtggtcaccccgaaccccacacctgaggtg
ccccctctggcccccgagcagcaagagatgatcgagaagctggtcgccatgcagaagcaa
tgcaacaagcgttcgttccttgaacgccccaaagtcactccttggcctcagagtcaagat
cctcttaatcgggaagtgcggcaacagcgctttgcccacttcacagagctggccatcatg
tctgtgcaggagatagtggactttgccaagcagctgccaggatttctggagcttacccga
gaggaccagattgccttgctcaagacttcaacaattgagatcatgctgctagagacatct
cggagatacgaccctgcccttgagagcatcaccttccttaaggacttcagctacaacaag
gacgactttgccaaagcaggtctacagtttgaattcatcaaccctattttcgagttctcc
aagggaatgaatgatctgcacctggatgaagcagaatatgctctactcattgctatcaac
atcttctctgcagaccggcccaatgtgcaggaccacgatttagtggagaggctacagcag
ccatatgtagacttgcttcattcatacatcaggattaagagaccaatggaccacctgatg
ttcccgcgcatgttgatgaagctggtgagcctgcgcacgctcagcagtgtccactcggag
caggtgtttgcactgcgcctccaggacaagaagctgccaccgctgctctccgagatctgg
gacgtccacgaatga

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