Clupea harengus (Atlantic herring): 105906747
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Entry
105906747 CDS
T09045
Symbol
rapgef3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04081
Hormone signaling
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
105906747 (rapgef3)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105906747 (rapgef3)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
105906747
NCBI-ProteinID:
XP_012690398
Ensembl:
ENSCHAG00000021231
UniProt:
A0A6P3W5V5
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Position
4:complement(9697481..9725218)
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AA seq
869 aa
AA seq
DB search
MHLFRSYTYRVHPDRYSMDTQTIRGISWTPLPDTLDTQNTMKQFLSERIMKAAKAVSSAL
IERNPVLFRDRKHHLKTYRQCGSGKELVDWLMKLNDCQSRSQAVGMWQVLVDEGILIHVK
QELNFQDRDTQFYRFIDTEFDLSVDEKYSKEEELQESLSLLIQMGPDALLTMILRKQPNQ
RSAEDLEVIYEELMHIKAAAHLSTSVRKELAAVLAFESHTKGGTVLFSQGDKGTSWYIIW
KGSVNVITHGKGLVTTLHEGEDFGQLALVNDAPRSATIIMREDNCHFLRVDKQDFIRILK
DVEANTMRLEEHGKAVLVLEKSSGQELTNQGGAGGSSKYTVMSGTPEKILEHLLDTIKLD
TNASDQIDPSVSDFLLTHQIFMPSGQLCTALLNHYHAEPSEGSELEKAAYALNTKQKIVK
LVLQWVSLYGLFLKDNTPAVDFLESLNKEVIGDSRLSAMLREQLKERRKKMLDNGHQPWI
RQHNQLDWFLGYDIPVGKCQAIKVNDKVLHEIFRPDHTFVCLMLPVNSSVQDIMEAMANT
SRDHVLVKMNSSGDREELKLESRAVSTSLGLNERLFLCSANQVDKLTPLKEQLGPEVNTM
DTLEQMGSKDIASQLTNYDWELFTAMHETELLYYVFGREKFPHTTTANLERFMRRFNEVQ
YWVVTELCLCVDLAKRAALLKKFIKMAIVLKEQKNLNSFYAVMFGLTNSAVTRLYKTWER
VPNKTRRIFTTYERILDPARNHRAYRLAVVKLSPPYIPFMPLILKDMTFIHEGNKNYTNT
LVNFEKMRMIARTLKIVTGCRNQSYSVPSSPQKGMTERMFLETPAIRLSTYSEQSLTLRS
TSNIRHYVQNLKVIDNQRKLTQMSRDIER
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcttccggagctacacttaccgggtccatcctgaccgctattccatggacaca
cagactattcgaggcatcagctggactcctttgcctgacaccctggacacgcagaacact
atgaaacagtttctatcagagaggatcatgaaagctgcaaaagcggtgtccagtgcatta
attgaacgcaatccagttctgttcagagatcgaaagcatcacttaaaaacatacagacag
tgcggtagtgggaaggagttggttgattggctgatgaagttaaatgactgccaatcacga
agccaggctgttggcatgtggcaggtcttggtggacgaaggcatcctaattcatgtgaag
caagagctgaacttccaggacagagacacgcagttctaccgcttcattgacacggagttt
gacctctcagtggatgagaagtactcaaaggaggaggagctccaggagagtttgtcactg
ctgatccagatgggtcctgatgctcttctcacaatgattctgcgcaaacagccgaatcag
aggagtgcggaagatctggaggtgatttatgaggagctgatgcacatcaaggctgctgca
cacctgtccacctcagtacggaaggagttggcggctgtgctggcgttcgagtctcacacc
aaagggggcacagtcttgttcagtcagggtgacaaagggacttcctggtacatcatctgg
aaggggtctgttaatgtcatcacacacggcaagggtctggtgactacgctgcatgaggga
gaggactttgggcagttggccttggtcaatgatgcgccccgatctgccacgatcattatg
cgtgaagacaactgccactttctcagagtggacaagcaagacttcatacgcatcctcaaa
gatgtagaggccaacactatgcgtctggaagaacatgggaaagctgtcctggtccttgaa
aagagctccggacaggagttaaccaatcagggcggagcaggaggcagcagcaagtacact
gtgatgtcaggaacaccagagaagatactggaacatttacttgacacaattaagctggac
acaaatgcgagcgaccaaatagatccttctgtgagtgacttcctgctcacccaccagatc
tttatgccctctggacagctgtgcaccgccctactgaatcattaccatgctgagccctca
gagggctctgagctggagaaggcggcctacgccctgaacaccaagcagaagattgtgaag
ttggttctccagtgggtctcgctgtatggactatttctgaaggacaacactccagcggtt
gacttcctggagagcctgaataaagaggtgataggcgactctcgcctctctgcaatgctt
cgagaacagctcaaggagagaaggaagaaaatgctagacaatggacaccagccctggatt
aggcaacataatcagcttgattggttcctgggctatgatatcccagtcggaaagtgtcag
gccatcaaggttaatgacaaagtcctgcatgagatcttcaggcctgaccacacatttgtg
tgcctgatgctgccagtgaactcatctgtgcaggacatcatggaagccatggcaaataca
agcagagatcacgtacttgtcaaaatgaactcttcaggagatagggaggagctcaagctg
gaatccagggctgtctccacctctctgggtctgaatgagagactgttcctctgctcagcc
aaccaagtggataaactgacacccttaaaggagcaactgggccctgaggtgaacaccatg
gacacacttgagcagatgggctccaaggacattgctagccaactcaccaattatgactgg
gagctgttcaccgccatgcatgagactgagctgctctactatgttttcgggagggagaaa
ttcccacacaccacgactgccaacctggagcgcttcatgcgccgcttcaacgaggtgcag
tactgggtggtgacggagctgtgtctgtgtgtagacctggccaagcgggccgctctgctc
aagaagttcatcaagatggccattgtgctgaaggagcaaaagaatctcaactccttctat
gctgtgatgtttggcctgaccaacagtgcggtcacccggctctacaaaacctgggagaga
gtacctaacaagacacggaggatcttcacaacttatgagagaatactggatcctgccagg
aaccacagggcgtatcggctggcggtggtcaaactcagccctccttatatcccctttatg
cctctcatattgaaagacatgacattcatccatgagggaaataagaactacaccaacact
ttggtgaactttgagaaaatgcgcatgatcgccaggacattgaaaatagtgacgggctgc
aggaatcaatcttactcagtgccctcctcaccacagaagggcatgacggagcgaatgttc
ctggagactcctgccatacgtctatccacgtattccgaacagtcgctcaccctgcgcagc
accagcaacatccgtcactacgtccagaacctcaaagtcatcgacaaccagaggaagcta
acacagatgtccagggacatcgaacgttga
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