Clupea harengus (Atlantic herring): 105907113
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Entry
105907113 CDS
T09045
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1-like
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105907113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105907113
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105907113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Motif
Other DBs
NCBI-GeneID:
105907113
NCBI-ProteinID:
XP_012690847
Ensembl:
ENSCHAG00000008519
UniProt:
A0A6P3W7U3
LinkDB
All DBs
Position
10:10343390..10367268
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AA seq
1291 aa
AA seq
DB search
MATSPAVGESQLQRIIRDLHDAVAELTKEYKETGEPISDDSSNLHRFSYKLEYLLQFDQK
EKTTLLGSRKDYWDYFSDCLAKVKGANDGIRFVKSISELKTSLGKGRAFLRYCLVHQRLA
DTLQQCLMNQRVTSDWYYSRSPFLKPHLSVDIISHLYELNDVQFDVASRGHDLDSDWPTF
ARRTLGMTNSPSHMWRPPTRSSSINSLASSYSQVNEFLGSPDMDRSGLGFPGDTSLADDS
SVMSAVDELRLELDQSELREKELLGHMGQLGGEASELRAVVLELQRQLDVSLDAQTQQVE
RERGLGTQMEALGAALEARQEQLEAAERRGRELVDQLDSALEAKGERAAGHLDSAQKIHE
LLDELKEEQRERAQALEEASDSQRRAERLGQELKAAQEALGRAEKKREDVQEECRQLKEE
LGALKEQLEEGKSGAQEESEGRRREAEGLRERLGATEVERDGLRASVAELEAGAREQTRR
TEDYRVQCSSLMGLNEGLLETVRRSEESQRDLTEARATLEAEAAALRGKMADATTAAEER
ERRLREEARALEERQQRAAAQMEMAEARVQRLEEENASLQAGSEEAQRRCLEEAQRERRE
AQAHAGLLEQQLGVRGEDLGRLHGELRSAVRDSEEARAQLRVAEEARQELAARAECLTEQ
EGRLNLAHVAELQERTEREAALGREVEEARGEVRELKAQLERLAVEHAEARESLHRANTE
TAELGINLCRLTAEREEACQRRCEAEQEAQREAERLNASLAALRQENTSLRQEIQQAENL
PEALLEVQEKLEKAESQARTQQDAGREEMQALKFQMSSEVMSQQSQIQSLKEELEGVKTQ
MKTEEKRASSLAEKVSELEGASDEYSRLIEEKDAHVTKSERDIRENEAEILKLREKLDSA
EQALAAGQGVCGDLKQRLEQVQTEAQSQRLSMDAQILELSHIKNHLEERLIELIKDKDAL
WQKSDALEFEQKLRAEEQWWLVDKEAARCLDCKGQFTWYLRRHHCRLCGRIFCYYCSHNF
VMTKHSTKKERCCRECYTEHSAVVERFTPAELDTHLSQPHVQPAPYKPTPRVTVTDPDTK
QDDAVYDIITEDEVNGIYDSDSLSHTTTTSQEGESEARAPTDLDAEDRRTGDTTPEEQEE
VVATVQDAEINLLQSGELSESVGLSLEEICGFGDASRELLVKASSYSLVPISVGDHGPTI
SWVFSSEPKSISFSVVFREDTHTPLEQSKVLIPLTRCNSHKETIQGQLKVRNPGIYTLVF
DNSFSRFISKKVLYHLTVEKPVIYDGSDCTQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagtccagctgtgggggagagccagctccagaggattatccgagatctgcac
gatgctgttgctgagctgactaaggagtacaaagagactggagaacccatcagtgatgac
agctccaacctacacaggttctcctacaaactagaatacctgctccagtttgatcagaag
gagaagaccaccctgctaggcagcaggaaagactactgggactacttcagtgactgctta
gccaaggtgaaaggagccaatgatgggattcgctttgtcaagtccatctctgagctgaag
acgtctctggggaagggccgcgctttcctgcgctactgtctggtgcaccagcgtctggct
gacacactacagcagtgcctcatgaaccagagggtcactagtgactggtactactcccgt
agccccttcctgaagcctcacctgagtgttgacatcatcagtcatctgtacgagctgaac
gacgtgcagttcgatgtggcgtcacggggtcatgaccttgactcagactggcccactttt
gctaggaggactcttggcatgaccaactcccctagtcacatgtggagaccacccactcgc
agttctagcatcaacagcctggctagctcctattcacaggtcaatgagttccttggcagc
ccagacatggaccgcagcggcctcggtttccccggtgacaccagcctggccgacgactcg
tcggtgatgagcgcggtggacgagctgcgcctggagctggaccagtcggagctgcgcgag
aaggagctactgggccacatgggccagctgggcggggaggcctcggagctgcgcgccgtg
gtcctggagctccagaggcagctggacgtctcgctggacgcccagacccagcaggtggag
cgcgagcgcggcctcggcacccagatggaggccctgggcgcagcgctggaggcccggcag
gagcagctggaggcggccgagaggcgcgggcgggagctggtggatcagctggactctgcg
ctcgaggcgaagggcgagcgcgccgccgggcacctcgactcggcccagaagatccacgag
ctgctggacgagctgaaggaggagcagcgcgagcgcgcccaggccctggaggaggctagc
gacagccagaggagggccgagaggctcggccaggagctgaaggccgcccaggaggcattg
gggcgagcggagaagaagagggaagacgtgcaggaggagtgcaggcagctgaaagaggag
ctgggcgcgctaaaggagcagctggaggaagggaagagcggggcgcaggaggagagcgag
gggcgcaggagggaggcggaaggcctgagggagcggctgggcgcgacggaggtcgagagg
gacgggctgagggcgagcgtggccgagctggaggccggcgccagggagcagacgcggcgc
accgaggactaccgcgtccagtgcagcagcctgatggggctgaacgaggggctgctggag
acggtgcggcgctcggaggagagccagagggatctgaccgaggcccgcgccacgctggag
gcagaggcggccgcgctgcgcggcaagatggccgatgccaccactgccgcggaggagagg
gagaggcgtctgcgcgaggaggcccgcgcgctggaagagcgtcagcagagggctgctgcg
cagatggagatggcggaggctcgggtgcagcgtctggaggaggagaacgcgtcactgcag
gcgggcagcgaggaggcgcagcgccgctgcctggaggaggcgcagcgggagcgccgggag
gcgcaggcgcacgccggcctgctggagcagcagctgggcgtgcgcggcgaggacctgggc
cgcctgcacggggagctgcgaagcgcagtgcgcgactctgaggaggcccgcgcccagctg
cgcgtggccgaggaggcgcgccaggagctcgcggcccgggcggagtgtttgacggaacag
gaggggcggctgaacctcgcccacgtggctgagctccaggagcggacagagcgcgaggcg
gcactaggccgcgaggtggaggaggcgcgcggggaggtgcgggagctcaaggcccagctg
gagcgcctggcggtggagcatgcagaggcgcgggagagcctgcaccgcgccaacaccgag
acggccgagctgggtatcaacctgtgccgtctgacggcggagcgcgaggaggcatgccag
cggaggtgcgaggccgagcaggaggcgcagagggaggccgagcgcctcaatgccagcctg
gccgccctcaggcaggagaacaccagtctgcggcaggagatacagcaggccgagaacctt
ccggaagcgctgctggaggtgcaggagaagctggagaaggccgagtcccaggccaggaca
cagcaggacgccgggcgcgaggagatgcaggcgctcaagttccaaatgagctctgaggtc
atgagccagcagagccagatccagagtttgaaagaggagctggagggggtgaagactcag
atgaagacagaggagaagagagcgtccagcctggcagaaaaagtctctgagctggagggg
gccagtgatgagtattctcggctgatcgaggagaaggatgctcacgtcaccaagtccgag
agggatattcgtgaaaacgaggcggagattctgaagcttcgagagaaactggacagtgca
gagcaggcgctggcggcgggacagggtgtgtgtggggacctgaagcagcggctggagcag
gtccagactgaggcccagagccagcggctcagcatggacgcccagatcctggagctctcc
cacatcaagaaccacctggaggagcgcctcatagagctcatcaaggataaggatgcgctg
tggcagaagtcggacgctctggagttcgagcagaagctgcgggccgaggagcagtggtgg
ctggtggacaaggaggccgctcgctgcttggactgcaagggccagttcacctggtacctg
cggcgtcaccactgcaggttgtgtgggcgcatcttctgctactattgcagtcataacttt
gtgatgaccaagcacagtactaagaaggagcgctgctgccgtgagtgttacacagagcac
agcgccgtggtggagaggttcacgccagccgagctcgacacacacctctcacaaccacac
gtccagccagccccctacaaacccacacccagggtgaccgtgacggatccggataccaaa
caggatgatgcagtatatgacatcatcaccgaggacgaagtgaacggcatctatgacagc
gattcgctctcacacacaacaactacctcacaggagggggagagtgaggccagggcaccc
actgacctggacgctgaggacagaaggactggggacaccacccctgaagagcaggaggag
gtcgtggccacagtgcaggatgccgagattaacctgctccagtccggagagttaagtgag
tcagtgggcctgagtctggaggagatctgtgggttcggggacgcgtcacgagagctcctc
gtcaaggccagcagctacagcctcgtccccatcagcgtgggcgaccacggccccaccatc
agctgggtcttctcatctgagcccaagagtatctccttcagcgtggtcttcagagaggac
acacacacacccctggagcaatcaaaggttctgattcctctgactcgctgtaactcgcac
aaagagaccatccagggacagctgaaggtgcggaaccctgggatctacacacttgtcttt
gacaactcattctcaaggttcatctcaaagaaggtgctgtaccacctgacagtggagaag
cccgtcatttatgatggtagtgactgcacacaatga
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integrated database retrieval system
