Clupea harengus (Atlantic herring): 105907162
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Entry
105907162 CDS
T09045
Symbol
tnfsf12
Name
(RefSeq) tumor necrosis factor ligand superfamily member 12
KO
K05474
tumor necrosis factor ligand superfamily member 12
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105907162 (tnfsf12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105907162 (tnfsf12)
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Tumor necrosis fators
105907162 (tnfsf12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
FtsL
DUF5360
DUF6377
Motif
Other DBs
NCBI-GeneID:
105907162
NCBI-ProteinID:
XP_012690896
Ensembl:
ENSCHAG00000021092
UniProt:
A0A6P3W7W2
LinkDB
All DBs
Position
18:7483557..7491751
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AA seq
239 aa
AA seq
DB search
MHRILQRRKIRKLRFVWAAMAVFAMVLALCSALFTVWTWRQTRDLSLSFTTLQERLEQVN
TQRREIVQLILEKREILEGRRLKRQAGTGKGKNGGFRKVASHFEITKTSFQSVGEEGFIK
GWEEETLNMSKAVTYRAETGTFKVERTGVYFLYCQVHFNENQSQYVKLEVSVTGGPSLQC
IEGYGTTPSSGSHMFHFLKPCQVSGLLRLTKGAELRAKTAPNLILKNNGKHYFGLFKIN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaattctgcagcggagaaaaatacgcaaacttcggtttgtatgggcagccatg
gcggtgttcgcaatggtgctcgctttgtgcagtgccctgtttacagtctggacatggcga
caaactagggacctgtccttatctttcacaactctgcaagagcgcctggagcaagtgaac
acccaacgcagagagatcgtccagctcatcctcgagaagagagagatcctggagggccgg
aggctgaagagacaagcggggacaggaaaagggaaaaatggaggctttcgaaaagtggcg
tcccattttgaaataaccaagacgtcctttcagagcgtgggtgaagaaggtttcattaag
ggatgggaagaggaaaccctcaacatgagcaaggcagtgacatacagagcggagacgggc
accttcaaagtggagcgcactggggtctacttcctctactgtcaggtgcacttcaacgag
aatcagagccagtacgtgaagctggaggtgtcggtcacgggcggcccatccctgcagtgc
atcgaggggtacgggaccaccccgtcctctgggtctcatatgttccacttcctgaagccg
tgccaggtgtcaggcctgctgaggctcaccaagggtgcggagctccgggccaagacagcc
cccaacctcatcctgaagaacaacggcaaacactactttgggctgttcaagatcaattga
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