Clupea harengus (Atlantic herring): 105907553
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Entry
105907553 CDS
T09045
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105907553 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907553 (prdm6)
03036 Chromosome and associated proteins [BR:
char03036
]
105907553 (prdm6)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
105907553 (prdm6)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
105907553 (prdm6)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
105907553 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
105907553
NCBI-ProteinID:
XP_031425966
Ensembl:
ENSCHAG00000019926
UniProt:
A0A6P8FQY9
LinkDB
All DBs
Position
7:1617019..1651470
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AA seq
565 aa
AA seq
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MLKPGDPSGSAFLKVDPTYIQHWQQLFPQAQLKNGALAQLQPPERLTIPLESLRQRPNLI
SASSSSGLTPSSASTPSSCMTSAVSSLTGLTQLSVPQIALFGQTLCTDLVTPDSNSQSKE
LCLSSNFKNDKGSKFKLTSEELDYYLYGQQRMEIIPLNNHTSDQTNRCDMCADNRNGECP
MHGPLHSLRRLVGTSSATSAAPPPDVPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQG
TWIGPFQGVPLLLEKVQSGAVRNTRHLWEIYDQEGTLQHFIDGNEPSKSSWMRYIRCARH
CGEQNMMVVQYRSCIFYQACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPATV
IEAMSRQESLQSFSKGGKGGSSGVLLRSMVFPHAPCPRGFSLLEKGGPADSPYNQMSSKN
QRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDRPYQCGHCSQSF
SQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQAT
QLSRHQRMPNECKPISESSESIEVD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagacccgagcggctctgcctttttgaaagtggacccaacctatatt
cagcactggcagcagctctttcctcaagcacagctgaagaacggcgccctcgcgcagctc
cagccaccggagcgactcacgatcccgttggagagcttgcgacagcgaccgaatctcatc
tctgcatcgtcctcctcgggtctcactccgtcctccgcatcaacaccctcctcctgtatg
acctcagcggtgtcttcgttgacaggtttaacgcaactctctgtaccacaaattgcactt
tttggacaaactttgtgtactgacctggtaacgccagacagcaactcacaatccaaggaa
ctctgcttgtcgtcgaacttcaagaatgacaaaggctccaagttcaaactgacttctgag
gagttagactactacctctacggacaacagagaatggaaataattccattgaacaatcac
accagcgaccagactaaccgctgtgatatgtgtgcggataaccgtaacggcgagtgcccc
atgcacggccccctgcactccctgcggcgtctggtgggcaccagcagcgccacctccgcg
gcgccccctccagacgtgcccgagtggctgcgggacctaccgcgggaagtctgcctctgc
accagcacggtgcccggcctcggctacggcatctgtgcggcccagcgcatcccgcaaggc
acctggatcggaccctttcaaggggtacccctcctgctggagaaggtgcagtcgggcgca
gtgaggaacacacggcatctgtgggagatatatgaccaggaggggacacttcagcacttt
attgatggcaatgagccaagcaagtccagttggatgcgatatatccgctgtgccagacac
tgtggcgagcagaacatgatggtggttcagtacaggtcatgtattttctatcaagcctgc
atggacatccctcgagggacagagctgctggtctggtacaacgacagctatacctccttc
tttggcatccctctccagtgcatcgcacaggacgaaaacctgaacgtccccgccactgtc
atcgaggcgatgtcccggcaggagagcctccagtccttcagtaagggtgggaagggggga
tcctccggagtgctgctgcgttccatggtcttcccccacgctccctgcccgcggggcttc
tctctgctggagaagggtggcccagctgactccccctacaatcagatgagctccaagaac
cagcgtgtgctggccagccccacctccaccagccagctgagctcagagttcagcgactgg
cacctatggaagtgtggccagtgcttcaagaccttcacccagcgcatcctgctccagatg
cacgtgtgcccacagaacccagacagaccataccaatgtggccattgctcgcagtccttc
tcccaaccgtcggagctgcggaaccacgtggtcacacactcaagcgaccggcccttcaag
tgcggctactgcggccgagcctttgctggagccactacactcaacaaccacatccgcaca
cacactggggagaagccattcaagtgcgagcgctgcgaccggagcttcacacaggccacg
cagctgagcagacaccagcggatgccaaacgagtgcaagcccatcagtgagagcagcgaa
tcaatcgaggtggattag
DBGET
integrated database retrieval system
