Clupea harengus (Atlantic herring): 105907591
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Entry
105907591 CDS
T09045
Name
(RefSeq) H-2 class II histocompatibility antigen, A-F alpha chain-like
KO
K06752
MHC class II antigen
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04514
Cell adhesion molecules
char04672
Intestinal immune network for IgA production
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105907591
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105907591
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105907591
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105907591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105907591
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105907591
Exosomal proteins of epithelial cells
105907591
Exosomal proteins of breast milk
105907591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
105907591
NCBI-ProteinID:
XP_031414523
Ensembl:
ENSCHAG00000001250
UniProt:
A0A6P8EEV9
LinkDB
All DBs
Position
21:complement(7165567..7167796)
Genome browser
AA seq
243 aa
AA seq
DB search
MALLVLPILLLTAVTSKSEVLHTHTTFDLCSDTDDAAYAFVIDGNEMFHLNITQKELVMR
LPEFTSVIDCPHCLSIALSAITTCRKNLNTTLKADNYPATHDAPQVVLYPKDEVELAVIN
TLVCFVNHFHPPPVNIKWAKNNVEVTGGVVTDQYIPHTDVTFYQFSYLTFTPQEGDIYSC
TVEHLALESPLTRIWGNVMILFSYKEPLRLKEHVGFRALCCMYEHSNVQLIAIAFIKWVK
QKT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctggttcttcctatattgctactgactgcagtaacttcaaagagtgaagtt
ttacacacccacactacgtttgatctgtgctctgacacagatgacgcagcctatgcattt
gttatcgatgggaacgaaatgttccacctgaacattactcagaaggagctggttatgagg
ttgcctgaatttacaagtgtgattgactgtcctcactgcctaagcatcgctttgtcagca
ataactacatgccgcaaaaatttaaacaccaccctgaaagcagacaactatccagcaaca
cacgatgcaccacaggttgtgctgtaccccaaagatgaggttgaactggcggtcatcaac
accttggtctgctttgtcaatcacttccacccgccaccagtgaacattaagtgggccaaa
aacaatgtggaagtgactggaggggtggttacggaccagtacatccctcacactgatgtt
accttctatcagttctcttacctgactttcacaccacaagagggcgatatctactcttgc
actgtggagcatctggctttagagtcacccttaaccaggatatggggtaatgtaatgatt
cttttttcatataaagaaccactaagactgaaggaacatgtagggtttagagctctgtgt
tgtatgtatgagcacagtaatgtacaattaattgcaatcgcatttataaaatgggtaaag
caaaaaacctaa
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