Clupea harengus (Atlantic herring): 105908268
Help
Entry
105908268 CDS
T09045
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105908268 (bcl11ba)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105908268 (bcl11ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
CCHC_BCL-11A
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
zf-C2H2_11
Zn_SUZ12
zf-C2H2_ATbp_2nd
Motif
Other DBs
NCBI-GeneID:
105908268
NCBI-ProteinID:
XP_031435876
Ensembl:
ENSCHAG00000019184
UniProt:
A0A6P8GF84
LinkDB
All DBs
Position
14
Genome browser
AA seq
849 aa
AA seq
DB search
MSRRKQGNPQHLSQREIITPDADHADAGLDVPEMPPNSHPHPYPHPHSHPLSHAMLDPAA
PGPLPSGLGDHDLLTCGQCHMPFPLGDILLFIEHKKKQCQALMGHHGCYDKMADRSGRGG
GGGGGGAGGGGGGGGGGGGGGSPSPPHQRPGLRKVVEPVEIGIQVTPEEEDERLLTPLKG
ICPKQESVQAGRDEPSSYICTTCKQPFSSAWFLLQHAQITHGIRIYLEAHTNNASLTPRI
TLPPPMGPESIPQSPLTNFLGDNNPFHLLRMTGPLLREPPPGFVENRLPATPPFVSPPPR
HHLDPHRLERLSAEEMGLISQHPSAFERVMRLNPMAIESQSMDFSRRLRELAGNNNNATP
PLSPSRSNPMHRLLNPNPFQASPKSPFLSTPPLPPIPPSSTTPPQTLKSKSCEFCGKTFK
FQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKSGSMTGRSDDGLSTTSS
PEPGTSDVTGEGMKNRDGDFSGEGGENEEEEEEEEEEELENESRPESNFSMDLEFCRNRE
NGSKPPSEEKDLSLGKMVENVGLHSIQQYNNLIVDNRKRLPFSKRCSDGHRDIGDEDSVV
GEMDRVERATVNGRTCGSGDSFSGLFLRKPTPITSPSLSNSSKRIKIEKDLDIPPAPLIP
SENVYSQWLVGYAASRHFLKDPFLGFTDSRQSPFATSSEHSSENGSLRFSTPPGDLLDGG
LSGRSGTASGGSTPHLGAPLRPGSKESRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYK
CELCNYACAQSSKLTRHMKTHGQLGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLMTNE
VKIEQAERS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcagggaaacccacagcacttgtcacaaagagaaatcataacaccg
gacgctgaccatgcggacgccgggttggacgtgcccgagatgccccccaactctcacccc
cacccttacccacacccgcactcgcaccccctctcccacgccatgctggaccccgccgcg
cccgggcctcttccctcggggctgggggaccacgacctgctcacctgcggccagtgccac
atgcccttccctctgggggacatcctgctcttcatcgagcacaagaagaagcagtgccag
gccctgatgggacaccacggctgctacgacaaaatggctgaccgcagcggccgaggaggc
ggaggaggaggaggaggagcaggaggaggaggaggaggaggaggaggaggaggtggcggc
ggcagcccctcgccaccccaccagcgccctgggctgcggaaagtggttgaaccggtcgaa
attggaatccaggtgactcccgaggaggaagacgagagactgctgacgcccctgaaagga
atttgccccaagcaggagagcgtccaagcaggtagagatgaaccatcgagctacatatgc
acgacctgcaaacagcctttcagcagcgcttggttccttctccagcatgcccagatcaca
cacgggatccgcatctacctggaggcacacaccaacaacgcatccctgactcctcgaatc
accctccctccacccatgggtcccgaatccataccccagtctcccctcaccaatttttta
ggagacaataaccccttccatctcttgcgaatgactgggcctctgcttcgagaaccaccc
cccgggtttgtggagaaccggcttcccgccaccccaccgttcgtcagccctcccccacgc
catcacctggacccccatcgcttggaacgccttagcgcagaggaaatgggcttaatctcc
cagcatcccagtgccttcgagagggtgatgcgcctgaaccccatggccatcgagtcgcag
tccatggacttctcgcgccggctccgggagctcgccggcaacaacaacaacgccacgcct
ccactctccccgagccgctccaaccctatgcaccgcctgctcaaccccaacccctttcag
gccagccccaagtcgccctttctgagcaccccgccgctgcctcccataccccccagcagc
acaacgccaccgcagacgctgaagagcaaatcgtgcgagttctgcggcaagaccttcaag
ttccagagcaacctgattgtccaccggcggagccacaccggtgagaagccttacaagtgc
cagctgtgcgaccacgcatgctcgcaggccagcaagctcaagaggcacatgaagactcac
atgcacaagtcgggctccatgacgggtcgctccgacgacgggctgtccaccaccagctcg
ccagagccggggacgagcgacgtcacaggggagggcatgaaaaaccgggacggggacttc
agtggcgagggaggtgagaacgaagaggaggaggaagaggaggaggaagaagagctagag
aatgagagcagacccgagtctaacttcagcatggacttggagttctgccgaaaccgcgag
aatggttccaagcccccctcggaagagaaggacttgtcccttggcaagatggtggaaaat
gtgggactccactctatccagcagtataataacttgatagtcgacaatcggaaaaggttg
cctttctccaaaaggtgctctgatggccatcgcgacataggtgatgaagactctgtggta
ggggaaatggaccgggtggaacgggcgacggtgaatggcagaacctgtggctctggcgac
tctttctcaggcttattcctccgaaagcccacacccatcaccagtcccagcctctccaac
tcctccaagaggatcaaaatcgagaaggacctggacattccccccgcacccctcatcccc
tccgagaacgtctactcccagtggctggtgggctacgcggcttcgcggcacttcctcaaa
gaccccttcctggggttcaccgattccagacaatctcccttcgccacctcctctgagcac
tcctcggagaacggcagcctgcgcttctccacgcctccaggtgacctgctggatgggggc
ctctcgggccgcagtggcacggccagcggcggcagcaccccacacctgggcgccccattg
cggccaggctccaaggagagccgtcgcagcgacacctgcgagtactgcgggaaggtgttc
aagaactgcagcaacctaacggtgcaccggcgcagtcacaccggcgagcggccgtacaag
tgcgagctgtgcaactacgcctgcgcccagagcagcaagctcacgcgacacatgaagacc
cacggccagctcggtaaggaagtgtaccgctgtgacatttgccaaatgcccttcagcgtc
tatagcaccctggagaaacacatgaaaaagtggcatggggaacacttgatgacaaatgag
gtgaaaatcgaacaagcagagagaagctaa
DBGET
integrated database retrieval system
