Clupea harengus (Atlantic herring): 105908670
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Entry
105908670 CDS
T09045
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X2
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00260
Glycine, serine and threonine metabolism
char00270
Cysteine and methionine metabolism
char00670
One carbon pool by folate
char01100
Metabolic pathways
char01230
Biosynthesis of amino acids
Module
char_M00035
Methionine degradation
char_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
105908670
00270 Cysteine and methionine metabolism
105908670
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
105908670
Enzymes [BR:
char01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
105908670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
105908670
NCBI-ProteinID:
XP_012692680
Ensembl:
ENSCHAG00000000235
UniProt:
A0A6P3WA36
LinkDB
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Position
2
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AA seq
613 aa
AA seq
DB search
MPSVPSSADNGSLAKICPHAAKMMLLNGDGKTNEEAILKGEAKMKVAAMLNGDGGHKLAT
NGHTNGEGNGLAKVHTPLDPEEENEEEGPMERQWIRPDLPSRCTWRLGGPNTGSPHSHAE
RTKPPGILPNILRRIGDTPLVRINKISKEFGLKCELLAKCEFFNAGGSVKDRISLRMVED
AEKEGILKPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIV
RTPTAARFDSPESHVGVAWRLKNEIPNAHILDQYRNPSNPLAHYDTTAEEILEQCDGRVD
MLVAGAGTGGTITGIARKLKERCPNIKIIGVDPEGSILAEPEELNVTNKTQYEVEGIGYD
FIPTVLDRSVIDGWYKSNDDESFAMSRMLLRDEGLLCGGSSGTAMAAAVRVAKELKEGQR
CVVILPDSIRNYMSKFLSDKWMCEKGFLKPEDLMIKKPWWWNLTLQVLNLSAPLTVLPTV
TCQKTIKILKEKAFDQAPVVDQTGVILGMVTLGNMLSSVLAGKVRPSDPVSKVLYKQFKQ
VRLTDNLGKLSRILETDYFALVVHEQIQYMTDDSPVLKQMVFGVVTAIDLLNYVATRERR
ERTLSECSLPDEQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgtaccctccagtgcagacaatggcagcctggccaaaatctgcccccatgct
gccaagatgatgctcctcaacggtgatggcaaaaccaatgaggaagccatcttaaaaggc
gaggccaaaatgaaggtggctgccatgctgaatggtgacggtggtcacaaactcgccaca
aacggacatacgaatggagaaggcaacggcctggccaaggtgcatacgccgcttgatcca
gaggaggagaacgaagaagagggaccaatggagaggcagtggattcggccggacctgccc
agcagatgcacctggagactggggggccccaacacgggttcccctcacagccacgcagaa
aggacaaaacctcccggcatcctgcctaacatcttgaggagaattggagacacccctctt
gtccgcataaataagatatccaaggaatttggtctgaagtgtgaactcttggcaaaatgc
gagttttttaatgccggcgggagtgttaaggaccgcatcagtctgcgcatggtggaagac
gcggagaaggaaggcatcctcaaacccggagacaccatcatcgagcccacctctggcaac
acgggcatcggtctggccctggctgccgccgtgaagggctaccgctgcatcatcgtcatg
cctgagaagatgagcatggagaaggtggacgtcctgcgtgctctcggcgcggagattgtc
cgcactcccaccgcagctcgcttcgactccccggagtctcacgtgggtgtggcctggagg
ctgaagaacgagatccccaatgcccacatcctggaccagtaccgcaatcccagcaacccc
ctggcccactacgacaccaccgcggaggagatcctcgagcagtgtgatggtagggtggac
atgctggtggcaggagctggcaccggtggcaccatcaccggcatcgcccgcaaactgaag
gaaagatgccccaacatcaagatcattggtgtggaccctgagggctcgatcttggcagaa
ccagaggagctgaatgtaaccaataagacacagtatgaggtcgagggcattggctatgac
ttcatccccactgtgctggaccgatctgtgattgatggctggtacaaatcgaatgatgac
gagtctttcgccatgtcgcgcatgctcctccgagacgaaggactcctgtgtggaggcagc
tctggtacagccatggctgctgccgtgagggtggccaaggagctgaaggagggccagcgc
tgtgttgtcattctgcccgactccattcgcaactacatgtccaaattcctcagtgataag
tggatgtgtgagaagggcttcctgaagcctgaggacctgatgattaagaaaccttggtgg
tggaaccttactctgcaggtgctgaatctgtctgctcctctgactgtcctgcccacagtc
acctgtcagaagaccatcaagatcctgaaggagaaggccttcgaccaggctccagtggtg
gatcagactggggtgatcctgggcatggtgacgctgggtaatatgctctcctcagtgctg
gcagggaaggtcaggccctctgaccccgtgagcaaggttctgtacaagcagtttaaacag
gtgcggctgactgacaacctgggcaaactttctcgtatcctggagacggactactttgct
ctagtggtgcatgagcagatccaatacatgaccgacgactcgccggtgctgaagcagatg
gtgtttggggtggtgacggccatcgacctgctcaactatgtggccacgcgggagaggaga
gaacgcacgctgtcagagtgctccctgcccgacgagcagtga
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