Clupea harengus (Atlantic herring): 105909396
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Entry
105909396 CDS
T09045
Symbol
psen2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105909396 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105909396 (psen2)
Peptidases and inhibitors [BR:
char01002
]
Aspartic peptidases
Family A22: presenilin family
105909396 (psen2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
105909396
NCBI-ProteinID:
XP_031418423
Ensembl:
ENSCHAG00000014780
UniProt:
A0A6P3WB31
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Position
24:complement(10099874..10110951)
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AA seq
446 aa
AA seq
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MNTSDSEEEVCNERTALVQTQSPTLPNYNRDHDMDLPEDVEPKGRHRVAGETSSPGQPTR
PTSGRESSTETDDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTEKNGQQLIYT
PFTEDTPSVGRRLLNSVLNTMIMISVIVVMTVFLVVLYKYRCYRFIHGWLILSSLMLLFW
FSFMFLGEVFKTYNVAMDYPTLVMIIWNFGAVGMVCIHWKGPLQLQQAYLIAISALMALI
FIKFLPEWSAWVILGAISVYDLIAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMV
GMANPPAAAEPPNQDTDEEMLQSERGLLEQEGAGRESPSLRGIGRSYSAEEEMEEDRGIK
LGLGDFIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITF
GLIFYFSTDNLVRPFMDSLAAHQFYI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcggacagcgaggaagaggtctgcaatgaacggactgctttggtccaaacc
cagagtccgaccctaccgaactacaaccgagaccacgacatggaccttcccgaggatgta
gaaccaaaggggcggcatagagtggcaggggagacgagctcgcccgggcagccaacgcgg
cccacatctggccgggagtcgtcaacggagacggacgacgaggagctgacgctgaagtat
ggggccaaacacgtcatcatgctgttcgtgcccgtcacgctgtgcatggtggtcgtcgtg
gcgaccatcaagtctgtcagcttctacacagaaaagaatggccagcagctcatctacacc
ccctttaccgaggacacgccctcggtgggccggcggctcctcaactccgtgctgaacacc
atgatcatgatcagcgtcatcgtcgtcatgacggtcttcctcgtggtgctctacaagtac
cgctgttacaggtttatccatggttggctgatcctctcctcactcatgctgctgttctgg
ttcagcttcatgttcttaggcgaggtgttcaagacgtacaacgtggcgatggactacccg
acgctggtgatgatcatctggaacttcggggcggtgggcatggtgtgcatccactggaag
gggccactgcagctgcagcaggcctacctgatcgccatcagcgccctcatggcccttatc
ttcatcaagttcctgcccgagtggtccgcctgggtcatcctgggggccatctccgtctac
gatttgattgctgtgctgtgtccaaagggtcctctgagaatgctggtagaaacagcccag
gagaggaatgagcccatattccctgcactcatatactcatccgccatgatttggatggtg
gggatggccaatccacctgccgcagccgaaccgccaaatcaggacacagatgaagaaatg
cttcagagtgaaagaggactccttgaacaggaaggggcggggcgagagagcccgtcactc
cgaggcatcgggaggagctactcagccgaggaggaaatggaagaagaccggggaatcaag
ctaggcctgggagacttcatcttctacagcgtgctggtggggaaggcggcggccaccgga
ggggactggaacacaacactggcctgctttgtggccatcctgatcggtctctgcctgact
ctcctgctgctggccatctttaagaaggctctgcccgcgctgcccatctccattaccttc
ggcctgatcttctacttctccacagacaacctggtgaggcccttcatggacagcctcgcc
gctcatcaattctacatatga
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