Clupea harengus (Atlantic herring): 105909735
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Entry
105909735 CDS
T09045
Symbol
otx5
Name
(RefSeq) orthodenticle homolog 5 isoform X2
KO
K09337
cone-rod homeobox protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105909735 (otx5)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105909735 (otx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
105909735
NCBI-ProteinID:
XP_012693836
Ensembl:
ENSCHAG00000021735
UniProt:
A0A6P3WAM8
LinkDB
All DBs
Position
9:22338881..22344708
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AA seq
294 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLSGPGMDLLHSAVAYPNTPRKQRRERTTFTRAQLDILEALFSKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKASPARDQN
AEANNSQQPYSPAPPPPGTSITPSSSSTSATVSIWSPASISPLPDPLSASNTPCMQRTSA
YPMTYTQAPAYSQSYGASSSYFTGLDCSSYLSPMHPQLSATGGALSPITASSMGGPLSQS
PASLSSQGYTAASLGFGAVDCLDYKDQAASWKLNFNAADCLDYKDQNSWKFQVL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcagcctcattacgccgtgaacgggttaactctgtccgggccg
ggcatggaccttctacactccgccgttgcatacccaaacactcctcggaagcagcgcagg
gagaggaccaccttcacccgtgcgcagctcgacatcctggaggcgctgttttcgaagaca
cgctaccctgacatcttcatgcgagaggaagtggcgctcaaaataaacttgccggaatcc
cgagtccaggtgtggttcaagaaccggcgggccaagtgccgtcagcagcagcagcagagc
agcggccagtccaagccgaggccacccaagaagaaggcctctccggcccgcgatcagaac
gcagaggccaacaacagccaacagccctacagccccgcgccgcctccacccggcacctcc
atcacgcccagctccagcagcaccagcgccaccgtgtccatctggagcccggcctccatc
tcgccgctgcccgacccgctgtcggcctccaacacgccctgcatgcagcgcacctctgcc
taccccatgacttacacccaggcccccgcctacagccagagctacggggcgtcctcctcc
tacttcaccggcctggactgcagctcctacctgtcccctatgcacccacagctgtcggcc
accgggggcgccctaagccccatcaccgcctcgtccatgggcggcccgctcagccagtcc
ccggcctccctctcctcccagggctacaccgctgcctcgctagggttcggtgccgtcgac
tgcttggactacaaggaccaggcggcctcgtggaaactcaacttcaatgcggctgattgc
ctggactacaaagaccagaattcctggaagttccaggtgttgtag
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