Clupea harengus (Atlantic herring): 105909768
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Entry
105909768 CDS
T09045
Name
(RefSeq) leucine-rich glioma-inactivated protein 1-like
KO
K25428
leucine-rich repeat LGI family member 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
105909768
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
Motif
Other DBs
NCBI-GeneID:
105909768
NCBI-ProteinID:
XP_012693887
Ensembl:
ENSCHAG00000011188
UniProt:
A0A6P3WAQ6
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Position
13:15713578..15724680
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AA seq
540 aa
AA seq
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MGYVRGILKRLTLLICVFMIQADGRRLKQPRCPAFCTCTKDNALCEGATIPRSFPPDVIS
LSFMKAAFSEIPKESFIHTPALHLLLFTTNSLDTIHEDAFIGLPHLEYLFIENNQIKSIS
PHAFRGLKTLIYLSLAYNNLRSLPKNLFNGMGALTKVDLRGNQLNCDCDLKWLVDWMYYS
NATVDPTSCSSPVLLQGKMVTDLVPQSFDCITAEFAFYQTLKFQSISVEAFTFGNDQYVV
FAQPFTGQCSFLEWDHVEMVFRNFDVIDSISTVICKPLVIDNQLFIIVAQLFGGSHIYKR
DISASKFIRIQDIDILKIRKPNDVETFQVDGEFFFVIADSSKAGSTTVYKWNGNGFYPHQ
ALHPWYRDTDVEYLDISGKPHLILSSSSQRPVVYQWSKGTKMFERRTDIPDMEDVYSIKH
FKVKGELYICLTHFIGDSKVMQWDGSMFGELQTMPSRGSMVFQPFTVGKWQYAILGNDYS
FTQVYRWDTKQGRFDPFQELNIQAPRAFSPVSIDNRGFLLASSFKGNAKIYEHLIIDLSN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgtaaggggaatcctcaagagactgaccctcctcatttgcgtcttcatgatt
caagcagacggcaggagacttaagcaaccccgatgtccagctttctgtacttgcaccaaa
gataacgcactatgcgaaggagctacgattcctcgcagcttccccccagatgtcatctca
ctatcatttatgaaggcggcattcagtgaaatccccaaggagagtttcatccacactccg
gctcttcatctcctcctcttcacaactaattcacttgacactatacacgaggatgcgttc
attggacttccacacctggagtatctattcattgaaaacaaccagatcaaatccatatca
ccacatgctttcagaggattgaaaaccctcatttatttgagcctggcctacaataatctt
cggtcattgccaaaaaatcttttcaatggtatgggggccctaacaaaagtagatcttcgt
gggaatcagctcaactgtgactgtgacctcaagtggcttgtagactggatgtactatagt
aatgccacagtggatccgacctcctgtagtagtccagtccttctccaggggaaaatggtc
actgaccttgtgccacagtcgtttgactgcattacagcagagtttgcattttaccaaacc
cttaaattccagtccatctcagtggaggcattcacatttggcaatgaccagtatgtggtt
tttgctcaaccttttactggacagtgcagcttcctggaatgggatcatgttgaaatggtg
ttcagaaactttgatgtcatagacagtatctccactgtgatttgcaaaccattggttatt
gataaccagctgttcatcattgtggcccagctgtttggtggctcccacatctacaaacgg
gatatctctgctagcaagttcatcaggatccaggatattgacatcctcaagataaggaaa
ccaaatgatgtggagaccttccaagtagacggcgaattcttctttgtcattgcagacagc
tccaaagctggctccaccacagtctacaagtggaacggcaacggcttttaccctcaccag
gcgttacacccgtggtaccgtgacacagatgtggagtatctggacatctctggcaaaccc
cacctgatcctctccagcagcagccaaaggcctgtggtataccagtggagtaagggcacc
aagatgtttgagcgcaggacagacattcctgacatggaggacgtttactccattaagcac
ttcaaagtgaaaggtgagctgtacatctgtctcacacactttattggcgactctaaggtg
atgcagtgggacggctccatgttcggtgaactacagacaatgccgtctcgtggctctatg
gtcttccagccattcactgtaggcaagtggcaatatgccatcctgggcaatgactactca
ttcacacaggtgtatcggtgggacacaaaacaaggacgatttgatcccttccaggagcta
aacattcaagcacccagagccttttccccagtgtccattgacaaccgagggttcttactg
gcatccagtttcaaaggaaacgcaaagatttatgaacatcttatcatcgacttaagcaat
tga
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