Clupea harengus (Atlantic herring): 105909781
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Entry
105909781 CDS
T09045
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105909781 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105909781 (trim37)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105909781 (trim37)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105909781 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
zf-C3HC4_2
HlyD_2
MRFAP1
LAMB1
Motif
Other DBs
NCBI-GeneID:
105909781
NCBI-ProteinID:
XP_031427446
UniProt:
A0A6P8FVH2
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Position
8:complement(5240791..5265008)
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AA seq
932 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCESHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVEKNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSVFVLSSFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLSETSKYEYRVEMVHQGSSDPSKNII
REFASDFEVGECWGYNRFFRLDLLATEGYLDRQNDTLVLRYQVRSPTFFQKCRDQSWYIN
QLESAQSSYVQQIHHLQERLAMQLFRHEKSPDQGKGGVRESRAEKAESGEEGVVPTAGGT
GSKTEEEEEDKTQQDDSNDLSDGDLEVDCLTGDEEVNHLDGSSTSGSSTATSNTEENDID
EETMSGENDVYGATLELEEGHMPEDAAGATGGSGPRATRRGAGAASASGLLEIDPVILIQ
LLDLKDRNHMDALWGVQPRPPTLLHNQAAVPSRKDRDRRPQAVRRSAPDSGVLIRLKAQM
AEVRNKMSDVKGQLEALGGEARAGPSLELAPPVELEGNCRKSELDLLFKGSVKHTRGGKK
SPPQADGVCVIGGVSARRPLEGGEKDLRGEDAPAQPHSSRESASMTEGVVKPRSVHSSPP
SLGSSCEREVREGGSLYGVTTSDLFSLNGLSAATAKTRRNTLGAGLLTDSSLDGDQEEGP
VESHQSRLSLAESHQSRLTLAEPSVSRSDEDVLCQKPVVHLMSSDSEVDCDTENEEDGEA
GHCQYDTHSLPEAGEQLMSDDLSFTAEEATER
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagagtgtagagagcatagcggaggtgtttcgctgcttcatctgtatggag
aagctgagggatgctagactctgcccacactgctccaaactctgctgcttcagctgcata
cggcgatggctaacagaacagagagcccagtgccctcactgtcgggcacctctgcagctg
cgtgagctggtgaattgtcgctgggcagaggaggtcacccagcagctagacacactgcag
ctctgcaacctctcaaaacatgaggagaacgacaaggacaagtgtgagagccaccacgag
aagctgagtgtgttctgctggacctgcaagaagtgcatctgccaccagtgtgccctctgg
ggcggcatgcatggtggtcataccttcaagcctctggcagagatctatgagcagcacgtt
accaaggtgaacgaggaggttgccaagctacgccgacgactcatggagctcatcagtctc
gtccaggaagtagagaagaatgtggaggcggtccgcggggcgaaggacgagcgtgtcaga
gagattaggaacgcagtggagatgatgatcgcaagactggacaaccagctcaagaacaag
ctcatcacactcatgggtcagaagacatctttgactcaggaaacagagttgttggaatct
ttgctgcaggaagtggagcaccagctgaggtcctgcagtaagagtgagctcatctccaag
agcccggagattctgctcatgttccagcaggtgcacaggaagcccatgcagtcattcgtc
accacacctgtgccccccgacttcaccagtgagctggtgccggcgtatgactccagtgtg
tttgtgctgtccagcttcagtaccttgcggcagcgggcagaccctgtgtacagcccccca
ctgcagatctcaggcctctgctggagactcaaggtttaccctgatggtaacggtgttgtg
cgtggcaactacctctctgtgtttctggagctgtcagctggtctgtctgaaacctccaag
tatgagtacagagtggagatggtacaccagggctccagtgacccgagtaagaacatcatc
agagagtttgcgtcggactttgaggtgggagaatgctgggggtacaaccgcttcttcaga
ctggacctgctggccacggagggatatctagaccgccagaacgacacactcgtactgagg
taccaggtgaggtcgcctaccttcttccagaagtgcagagaccagagttggtacatcaac
cagctggagtctgcacagagcagctacgtacagcagatacaccacctgcaggagaggctg
gccatgcagctgttccgccatgagaagagcccagaccaggggaaggggggtgtgcgtgag
tctcgggcggagaaggcggagtcaggagaggagggggtggtgccaacagcaggggggact
ggaagcaagacggaagaggaggaggaggacaagacacagcaggacgactccaacgacctg
tctgacggtgatctggaggtggactgtctcacgggggatgaagaggtgaaccatctggac
ggcagcagcacctctggcagctccacggcaaccagcaacacggaggagaacgacatcgac
gaggagaccatgtctggtgagaatgatgtgtacggggccactctggagttggaggaggga
cacatgcctgaggatgcagctggagccacaggtggttctggcccgcgggcgacccggcgc
ggagcaggagccgccagtgccagtgggctgctggagatcgacccggtcatcctcatccag
ctactggacctcaaggaccgcaaccacatggacgcactgtggggggtgcagcccagacca
ccaacactgctgcacaaccaggctgcagtcccctcccgtaaggaccgtgaccggcgccct
caggcagtgcggcggtcagccccggactctggggtcctgatccggctgaaggctcagatg
gcggaggtgcggaacaagatgagcgacgtgaagggccagctggaggccctggggggggag
gcgcgcgccgggccctcgctagagctggcgccccctgtggagctggaggggaactgcagg
aagagtgagctggacctgctcttcaagggctccgttaaacacacccgcggtgggaagaag
tctccccctcaggcagacggtgtgtgtgtgatagggggtgtgtccgcacgccggcccctc
gaggggggagagaaagacctgaggggggaggacgcccccgcccaaccccacagcagcaga
gagtctgccagcatgactgagggtgtggtgaagccgcgtagtgtgcacagctctcccccc
tccctgggcagcagctgtgagcgggaggtccgtgagggggggtcactgtacggggtcacc
acctctgaccttttctctctcaacggcctgagcgccgccaccgccaagacacgcaggaac
accttgggggcagggctgctgactgacagctctctggatggagaccaggaggaggggcct
gtggaatcccaccaatcacggctatcactggcagaaagccaccaatcgcggctcacgttg
gcagagccctccgtctcccgtagtgatgaagatgtgctgtgtcagaagcctgttgtgcac
ctgatgagcagtgacagtgaggttgactgcgacacggagaatgaggaggacggagaagct
ggacactgccaatacgacacacactcactgcctgaagcaggggagcagctgatgtctgat
gacttgagcttcacagcagaagaggccactgagagatga
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