Clupea harengus (Atlantic herring): 105909849
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Entry
105909849 CDS
T09045
Name
(RefSeq) alpha-1,3-galactosyltransferase 2-like isoform X1
KO
K20736
alpha-1,3-galactosyltransferase 2 [EC:
2.4.1.87
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00603
Glycosphingolipid biosynthesis - globo and isoglobo series
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
105909849
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105909849
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.87 N-acetyllactosaminide 3-alpha-galactosyltransferase
105909849
Glycosyltransferases [BR:
char01003
]
Glycan extension
ABO blood group
105909849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
105909849
NCBI-ProteinID:
XP_031423517
Ensembl:
ENSCHAG00000006745
UniProt:
A0A6P8FJY6
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All DBs
Position
5:complement(10165414..10198958)
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AA seq
350 aa
AA seq
DB search
MVLSKNTQVRGNICSLPSRKTALALCILTLFVVYHIPYSIRFLEGLIPMDKCQLVGSEAL
KLDNAVDITLKLGSRSDVQTCTYWGAPIIWDGMFDPEAYDQTHKRTHTSVALTVFAVGRY
LDAYLKDFLRSAEIYFMVGLPVTYYVFTDVPEKVPALNLAPGRELKVFAVERHSRWQDIS
MMRMKSIMEVIDTHIRHHNQYVFCMDVDQVFGGRFGAEALGDSVALLHAYYYHRFRYMLT
YDQNPKSQAYMAESQGDFYYHAAVFGGSWQRVRQMTEACYRGIIKDKDNGVEALWHDESH
LNKYLWQHKPSRVLSPEYCWDPSVGYRSDIHVTRLLWREKDYGKLRDKAN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcagtaaaaacacccaagtacgggggaacatctgctctttgccctctcgtaaa
actgctctggcactatgtatactcacgcttttcgttgtctaccacataccatactctatc
agattcctagagggcttaattcctatggataaatgtcagttggttggaagtgaagcactc
aagctggacaatgctgtggacataactcttaagcttgggtctagatccgacgttcagacc
tgcacttactggggtgcacccatcatttgggatgggatgtttgacccagaggcttatgat
cagacccataaaaggacccatacctcagtggcgctgactgtatttgctgtgggcagatac
cttgatgcctacctgaaagacttcctgagatctgcagaaatctactttatggtgggttta
cctgtgacctactacgtctttacagacgtcccagagaaggttccggccctaaacctggca
ccgggacgagagctgaaagtcttcgcagtggaacgccactcccggtggcaggacatctca
atgatgcgaatgaaatccatcatggaagtcatcgacacccacattcgccaccacaatcag
tacgtcttctgcatggatgtggaccaggtctttgggggccggtttggtgcagaggctttg
ggggactccgttgccctcctccacgcatactactaccatcgcttcaggtacatgttgacg
tacgaccagaaccccaaatcccaggcctacatggcagagtcacagggggacttctactac
cacgcagctgtgtttggtggctcctggcagagggtgagacagatgacagaggcgtgctac
cgcggcatcataaaggacaaggataatggggtggaggctctctggcacgacgagagccac
ctgaacaaatacctgtggcagcacaagcccagcagggtgctgtctcccgagtactgctgg
gacccctccgtcgggtatcgcagtgatatccatgttacacgactcctctggcgagaaaag
gactatggcaagcttagggacaaagcaaattaa
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