Clupea harengus (Atlantic herring): 105910328
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Entry
105910328 CDS
T09045
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105910328
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105910328
04261 Adrenergic signaling in cardiomyocytes
105910328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105910328
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105910328
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Paralog
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Motif
Pfam:
VGCC_alpha2
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
DUF2201
Motif
Other DBs
NCBI-GeneID:
105910328
NCBI-ProteinID:
XP_031419479
UniProt:
A0A6P8F3R4
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Position
3:31048393..31094329
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AA seq
879 aa
AA seq
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MDSRKTPNKIDLYDVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVGEMLETL
SDDDYVNVVFFNTHVNNTACFDRLVQANVRNKKILKDAVQNISAKGITNYTKGFEFAFDQ
LSRENISRAGCNHIIMLFTDGGEERAQAVFEKYNPSKKVRVFTFSVGQHNYDTKPIQWMA
CANKGYFFEIPSIGAIRINTQEYLDVLGRPMVLADKDAKKVQWTNVYLDALELGLVITGT
LPVFNKTRSKEGSQNQQNQLILGVMGVDVSLNDIKRLTPRFTISPNGYYFAIDPNGYVLL
HPNLQPKKRIRNRHIRLNNKYAITFHEEPVTLDFLDAELENANKVEIRKQMIDGETGAMT
IDTLVKSYDERYIDRGGRTYTWAPVNGTDYSLALVLPEYGRHYLRANLGDTIQQAKSILG
NKVLETLQVENFEEYGYTFIAPRQYCKDLNLRDNNTKFLLDFNEYIDRNTPSDPMCNVSL
VNRLLLDAGLTAELVKLWKEQSVDGVLAQFVATDGGITRVYPKSAGEDWSEDPETYEASF
YKRSLDSNIYIFTAPYPNSAESKDSSYETGVLVSKVVNLNIDDVTLKPAVVGVKLNVSAW
MNIFINATVKKDCKEEICGCLRNDKQVDCVLLDDGGFLLMSNQDEYISQIGQFFGEVDPV
LMISLVNKSLYSFNKTYDYQSVCDPERDSKAAAASRSVYVPTIADMLHLGWWASAAAWSI
LQQLILSLTLPSTSYAYSEEDLPDTFFKESCITEQTQYFFENGNDTFTGTLDCGNCSRLY
LAKKLPKTNLVFLISDAKSTCLSCDTKPLRQAEQPSSGPDPCELALNPRYRKGPDVCFDE
DPDEEFVCPISGCSSALASAPLIVLLRMAILWSLNGGCL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggattcacgaaagacccccaataagatagacctttacgacgtccgccgcaggccatgg
tatatacagggagctgcttcacccaaggacatgttgattctggtcgatgcgagtgggagt
gtatctggtctgaccctcaagctcatccgaacctcagtgggcgagatgctggagaccctg
tctgatgacgactatgtcaacgtggtctttttcaacacacatgtgaacaacacagcctgc
ttcgaccgtctggtccaagccaacgtgcgcaacaagaagatcctgaaggacgctgttcaa
aacatctcggccaagggcatcacgaactacaccaaaggctttgagtttgctttcgatcag
ctttcacgggagaacatctccagggcaggctgcaaccacatcatcatgctcttcaccgat
gggggagaagagcgggctcaggcggtctttgagaagtacaatcctagtaaaaaggtgaga
gtgttcacgttttcagtggggcagcacaactatgacacaaaacctatccagtggatggcc
tgtgctaacaaagggtacttttttgagatcccatccatcggagcaatccgtatcaacact
caggagtatttggatgtcctcggtaggcccatggttctcgcagataaggatgccaagaag
gtgcaatggacaaatgtctacctagatgcactggagctaggcttggtcatcacagggact
cttcccgtcttcaacaagaccaggtccaaagaaggctcgcaaaaccagcaaaaccaactg
atcctgggagtgatgggagtggacgtgtctctgaacgacatcaagagactcacacctcgc
ttcactatcagccctaatggatactactttgccatcgatcccaacggatacgtgctgctg
catcccaacctgcagcctaagaaaaggatccgtaatcgtcacataaggctaaataacaaa
tatgccattaccttccatgaggagccggtcaccttggactttcttgatgccgagctagaa
aatgccaataaagtggagataaggaaacagatgattgatggggagacaggagcaatgacc
atagacacactggtgaagtcatatgatgagaggtacatcgacagaggcggcaggacatac
acttgggcaccagtgaacggcactgactacagcttggcccttgtcttgcctgagtacggt
cggcattaccttcgagctaatctgggagacactatccagcaggccaaatcaatcttgggg
aacaaggttttagaaacattgcaggtggagaattttgaggaatatggctataccttcata
gcacccaggcaatactgtaaggacctgaatctccgagacaacaacaccaagttcctgctg
gacttcaacgagtacatcgacaggaacaccccaagcgaccccatgtgtaatgtaagtttg
gtgaacaggctgcttctagatgctgggcttacggcagaacttgttaaattgtggaaagaa
cagagcgtggatggcgtgttggcccagtttgtggccacagatggcgggatcactcgagtc
tacccaaagagtgctggagaagattggagtgaggatcctgagacctacgaggccagcttt
tacaagcgcagtctggacagtaacatctacatattcactgctccatatccaaacagtgca
gaaagcaaggactccagttacgagaccggcgtcctggtcagcaaggtggtcaacttgaac
atcgacgacgtgaccctcaagcctgcggtggttggggtgaagttgaacgtctcagcttgg
atgaacatctttatcaacgccactgttaagaaagattgcaaagaagaaatatgtggctgc
ctaaggaacgataagcaagtggactgtgtgttactggatgatggaggcttcctgctcatg
tccaatcaggatgagtacattagtcagataggacagttcttcggggaggtggaccccgtg
ctgatgattagcttagtgaacaagtccctttactctttcaataaaacatacgactaccag
tctgtctgtgacccagagagagatagcaaggctgctgcagcatccagatctgtctatgtg
cccaccatcgcagacatgttgcatttaggatggtgggcctccgctgctgcctggtcaatc
ctgcagcagctaatcctcagtttgaccctgccaagcacctcatatgcatactcagaggag
gacctgcctgacaccttcttcaaggagagctgcatcactgaacagactcagtacttcttt
gagaatggcaacgacaccttcactggcacccttgactgtggaaactgctccaggctgtac
ctggcgaagaagctgcccaagaccaacctggtgttcctcatctccgacgccaagagcacc
tgtctgtcctgcgacaccaagcccctgagacaggcagagcagccgtcttctggaccggac
ccctgtgagctggctctgaatccccggtatcgaaaaggaccggacgtctgtttcgacgaa
gaccccgatgaggaatttgtgtgcccaatcagtggctgttccagtgctttggcctctgcc
cctctcattgttttactgcgtatggccattctgtggtcactgaatggaggatgcctctga
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