Clupea harengus (Atlantic herring): 105911302
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Entry
105911302 CDS
T09045
Symbol
cd40lg
Name
(RefSeq) CD40 ligand isoform X2
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04060
Cytokine-cytokine receptor interaction
char04514
Cell adhesion molecules
char04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105911302 (cd40lg)
04514 Cell adhesion molecules
105911302 (cd40lg)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105911302 (cd40lg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105911302 (cd40lg)
04090 CD molecules [BR:
char04090
]
105911302 (cd40lg)
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Tumor necrosis fators
105911302 (cd40lg)
CD molecules [BR:
char04090
]
Proteins
105911302 (cd40lg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
105911302
NCBI-ProteinID:
XP_031443132
Ensembl:
ENSCHAG00000014075
UniProt:
A0A6P8H5Z9
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Position
20:4455511..4457985
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AA seq
279 aa
AA seq
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MINTYHTSLPPPPVPPRMVHGRPEPRQHTGLLWFLSVVLVLHMMLTFGGFVYLFDKGDQA
SHWEGEFHEKYLDDFLILKRLQRCDDDDLDDQSLLDCKQLLDKFRNVMAKASKTEGRVAM
LTGEHYRGAVAHMPVKTSSKPCTATDNQACALEWNSDHSTKANVDTAGDSRLSIKHSGYY
YVYSQVTFSVKNSKAAPTNTIRHVKWKNSVKLFSKKVELEESDEVLLRAYCPSNLSSQCT
ASQGGVFKLEKDEQLYVQVTDLSWVNYDWNATFFGLYKL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgataaacacctaccacactagtctccctccgccaccagtgcctccccggatggtccac
ggcaggcctgagcctcggcagcacacaggcttgctctggttcttgtctgtggtgctggtg
cttcacatgatgctcacgtttgggggattcgtctacctttttgacaagggcgaccaggcc
agtcactgggaaggagaatttcatgaaaagtaccttgatgacttcctcatccttaaaaga
ctacagagatgtgatgatgatgacttagatgaccagtcactgctcgactgcaaacagctt
ctcgacaaattcaggaacgttatggcaaaggcttcaaaaacagaaggcagagttgccatg
ttgactggggaacattaccgcggagctgtggcacacatgccagtgaagacaagttcgaag
ccatgcacagcaacagacaatcaggcctgcgcgctagagtggaactctgaccactcaact
aaggccaatgtggacacagcaggcgacagcagactctccatcaagcactcgggctactac
tatgtctactcgcaggtcaccttctccgtcaagaactccaaagcagcgccaacgaacacc
atcagacatgtcaagtggaagaattcggtcaaactgtttagcaagaaagtggaacttgag
gagagtgatgaggtcttactcagagcctactgcccgtccaacctatcatcgcaatgcacg
gcctcccagggaggagtgttcaagctggagaaggacgaacagctgtacgtgcaggtgact
gacctgagctgggtgaactacgactggaatgccaccttctttggattatacaaactttaa
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