Clupea harengus (Atlantic herring): 105912991
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Entry
105912991 CDS
T09045
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105912991 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105912991 (setdb1b)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
105912991 (setdb1b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
105912991 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
105912991 (setdb1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
Pre-SET
MBD
Chromo_MORC2_6th
Cic
DUF4537
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-GeneID:
105912991
NCBI-ProteinID:
XP_012697457
Ensembl:
ENSCHAG00000006237
UniProt:
A0A6P3WFT0
LinkDB
All DBs
Position
11
Genome browser
AA seq
1282 aa
AA seq
DB search
MEMEMEVEVEVESLERELEEELGVSLDELKQWIEEQVEKSEVVQQRKAQLAELSTWVEQR
EREVASVDSLCLNASESVEECEELVKQVYIKKGLTYRESSSEDEGGSVVETSEVIEIDDD
DDDDVIAVGCLVPPKTITTPVKDPVLKEASAALQRSSQQVQKLAQTVTSPTAPSSAVGLS
PPKPPMVTPLRSGGLNVPAVFVSQAPRNTPTQPNLSLKEDTMKVDMSILGKKRTKTWHKG
TLIAIKSVGNTFKYKVKFENKGKSLLSGNHVAFDYNPTLERLYVGARVVAKYKDGNQVWL
YAGVVAEMPNSKNRMRFLIFFDDGYASYVSLPELYPVCRPMKYTWEDIEDASCKDFIQEY
ITSYPNRPMVLLKPSQLIKTEWEGTWWRSRVEEVDGSLVKILFLDDKRSEWIYRGSTRLE
PMFNLKMNTANNQEKKVAGQPRTRPNMGALRSKGPVVQYTSEFRTAPQTMGPRPLATQPA
APKPVPVPLPVPLSLPVPHPVPVPVPVSVPVPVLAPVPPAQTLRSESPDSRFKFQLAKKS
TTPYIPQRPGLLPGHQASVKTVVPILNQGTQSRYFLVQAGAVQTLTTVVPPQQPSFPTPA
LPKDRIPQEPSYQAPNDRLFYLSHNCSPDCLKRIRPAKHDQYCGRNPLLTPLLYEFRRMT
GRRRLNRKMSFHVIYKAPCGLCLRNMAEIERYLFQTHCDFIYLEMFCLDPYVLVDRRFQP
QRPFYFIRDITNSNEDIPLSCVNEIDNKPPPDVIYSKERLPADGVFINTNPEFLVGCDCT
DGCRDKSKCSCHQLTMQATGCTPGAQINGSAGYVNKRLEECLPTGIYECNKRCRCNHQMC
TNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDE
YFANLDHIESVENFKEGYESEAHCSDSEGSGVDMSRVKLSATPTLQTKASVKNEDNSSSG
NGGKGQADSSGEGEDDDNEESNEDDDDSSDDTFVKDTYFTSSSVWRSYTTRRQAKGMKEG
SQDSKDGMSMSTEGKEERKPPPMPEESGKSKVASWLSSSPATVTVKTEGLKTEKKEPVEA
KITVKTEGGKKPAGNTDVMSLSDSDDVQTISSGSDDNKEREKKTQALVKRQVAVKSTRGF
ALKTSHGMMVKTGPVKPQVEGPATGTGPTAPPQNTGGGGGGDAVSKSTRQFFDGEESCYI
IDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEV
GSVEGKELLCCCGSTECRGRLL
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagatggaggtggaggtggaggtggagagtttggagcgggagctggaggag
gagttgggcgtgtcgctggacgagctcaagcagtggatcgaggagcaggtggagaagagt
gaagtggtgcaacagaggaaagcccagctggctgaactctccacctgggtcgaacagagg
gagagagaggtggcttccgtggatagcctttgcctcaatgcttcagagtctgttgaagaa
tgtgaggagctggtgaaacaggtgtacatcaagaagggcctgacgtaccgggagagcagt
tcagaggacgagggagggagtgtggttgagacgtcggaggtcattgagatcgatgatgac
gacgatgatgacgtgatagccgtgggttgtttggtcccaccaaagacaatcactacgcca
gtgaaggaccccgtgctgaaggaggcgtctgcagcgctccagcgcagctcgcagcaagta
cagaagctcgctcagaccgtcaccagccctactgccccctcatctgccgtcggtctcagc
ccccccaaaccccccatggtcaccccgctccgctcgggggggctcaacgtcccggccgtg
tttgtctcgcaggcgccccgcaacacccccacccagcccaacctctccctcaaggaggac
accatgaaggtggacatgagcattctgggtaaaaaacgcaccaagacctggcacaaaggc
accctcatcgccatcaaatctgtgggtaacacgtttaagtacaaggtgaagtttgagaac
aaggggaagagtttactatctggcaaccacgttgcgttcgactacaaccccacccttgag
cgactgtatgtgggcgcccgtgtcgtcgccaagtataaggacggtaaccaagtgtggctg
tacgctggcgtcgtcgcagagatgcccaacagcaagaaccgtatgaggttcctgatcttt
tttgatgatggatatgcctcatatgtcagcctgccagaactctacccagtctgcagacca
atgaagtacacatgggaggacatagaggacgcgtcctgcaaggacttcattcaggagtac
atcacgtcctaccccaaccggcccatggtgcttctcaagcccagccagctcatcaagacc
gagtgggagggcacctggtggcggagccgcgtggaggaggtggacggcagcctcgtcaag
atcctcttcctggatgataaacgcagtgagtggatctaccgcggttctacacgtctagaa
cccatgttcaacctgaagatgaacactgctaacaaccaggagaaaaaggtggctggacag
ccaaggactcgtccaaatatgggagccttgaggagtaaagggcctgtggtccagtacacc
agtgagttcaggaccgcgccccagaccatgggccctcgacccctcgccacccagccagcc
gccccaaaacctgttcctgttcctcttcctgttcctctttctcttcctgttcctcatcct
gtccctgttccggtccccgtctccgtccctgtccctgtcctcgcccctgtcccccctgcg
cagactctccgctcagagagtccagacagtcggttcaaattccagttggctaaaaaaagc
accactccatacatcccccagcgcccagggttgctccccggccatcaggcttctgtgaag
acggtcgtgcccattcttaaccagggcacccagtccaggtatttcctggttcaggcgggt
gcggtgcagaccttgacgacggttgtccctccccaacagccgtccttcccgacacctgcc
ttacccaaggaccggatcccccaggagccgtcctaccaagcgcccaacgaccgcctcttc
tacctgtcgcacaactgctcgcccgactgcctgaagcggatccgaccggccaaacatgat
cagtactgcggacgcaacccgctgctcacacccctgctctacgagtttcgccgcatgacc
ggacgccggcggctcaaccgcaagatgtcgttccacgtcatctacaaggccccgtgtggg
ctgtgcctgcgcaacatggcggagatcgagcgctacctgttccagacgcactgcgacttc
atctacctggagatgttctgcctggacccgtacgtgctggtggaccggcgcttccagccg
cagcggcccttctacttcatccgcgacatcaccaacagcaacgaggacatcccgctctcc
tgcgtcaacgagatcgacaacaagccgcctcccgacgtgatttacagcaaggagcgcctc
cccgccgacggtgtcttcatcaacaccaaccccgaattcctggtgggctgcgactgcacc
gacggctgcagggacaagtctaagtgctcgtgtcaccagctgaccatgcaggctactggc
tgtactcctggagcacagatcaacggcagcgccggctacgtcaacaaacggctggaggag
tgtctgcccacagggatatacgagtgcaacaagcgctgccgctgtaaccatcagatgtgc
actaacaggctggtgcagcacggtctgcaagttcgccttcagctcttcaagacccagaac
aagggctggggcatccgttgcctcgacgacgttgccaagggctcctttgtctgtatctat
gcaggcaagatcctgactgatgactttgctgataaggagggcctggagatgggcgatgag
tactttgccaacctggaccacatcgagagtgtggagaacttcaaggagggctacgagagc
gaggcgcactgctccgacagcgagggcagcggagtggacatgagccgtgtcaaactcagc
gccacccccaccctccagaccaaagcctccgtcaagaacgaggacaacagcagtagcggc
aacggcggcaaaggccaagctgattcctcaggagagggagaggatgacgataacgaggag
tctaacgaggatgatgatgacagctcagacgacacgtttgtgaaggacacatactttaca
tccagctctgtgtggagaagctacaccacgcgcagacaggccaagggcatgaaggaaggg
agccaggacagtaaggatggcatgagcatgtccacggagggcaaggaggagaggaagccg
ccgcccatgccggaggagagcgggaagagtaaagtggcctcgtggctcagctcctcgccc
gccactgtcacggtcaaaacagagggcctgaagactgagaagaaggagccagtggaagcc
aagataactgtgaaaactgagggtgggaaaaagccagctggaaacacggatgtgatgagc
ctctctgacagtgacgatgttcagaccatcagctcaggctcagatgacaacaaggagcgt
gagaagaagactcaggcattggtaaagagacaggtagcggtaaagtctacgcggggcttc
gctctgaagacctcccatggtatgatggtgaagacggggccggtgaaaccccaggtggaa
gggccagcgacggggacggggcccaccgcccccccgcagaacacaggtgggggaggaggg
ggtgacgcggtctccaagtccacacgacagtttttcgatggagaggagtcctgttacatc
atcgacgccaaattggagggcaacctcggacgctacctcaatcacagctgcagtcctaat
ctctttgtccagaacgtgtttgtggacactcatgacctgcgcttcccttgggtagccttc
tttgccagcaagcgtatccgggcgggcacagagctgacgtgggattataactacgaggtt
ggcagcgtggagggcaaggagctgctgtgctgctgcggctccacagagtgcagagggcgc
ctgctgtag
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integrated database retrieval system
