Clupea harengus (Atlantic herring): 105912991
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Entry
105912991 CDS
T09045
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105912991 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105912991 (setdb1b)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
105912991 (setdb1b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
105912991 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
105912991 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
Pre-SET
MBD
Chromo_MORC2_6th
DUF4537
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-GeneID:
105912991
NCBI-ProteinID:
XP_012697457
Ensembl:
ENSCHAG00000006237
UniProt:
A0A6P3WFT0
LinkDB
All DBs
Position
11:complement(11527000..11545362)
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AA seq
1282 aa
AA seq
DB search
MEMEMEVEVEVESLERELEEELGVSLDELKQWIEEQVEKSEVVQQRKAQLAELSTWVEQR
EREVASVDSLCLNASESVEECEELVKQVYIKKGLTYRESSSEDEGGSVVETSEVIEIDDD
DDDDVIAVGCLVPPKTITTPVKDPVLKEASAALQRSSQQVQKLAQTVTSPTAPSSAVGLS
PPKPPMVTPLRSGGLNVPAVFVSQAPRNTPTQPNLSLKEDTMKVDMSILGKKRTKTWHKG
TLIAIKSVGNTFKYKVKFENKGKSLLSGNHVAFDYNPTLERLYVGARVVAKYKDGNQVWL
YAGVVAEMPNSKNRMRFLIFFDDGYASYVSLPELYPVCRPMKYTWEDIEDASCKDFIQEY
ITSYPNRPMVLLKPSQLIKTEWEGTWWRSRVEEVDGSLVKILFLDDKRSEWIYRGSTRLE
PMFNLKMNTANNQEKKVAGQPRTRPNMGALRSKGPVVQYTSEFRTAPQTMGPRPLATQPA
APKPVPVPLPVPLSLPVPHPVPVPVPVSVPVPVLAPVPPAQTLRSESPDSRFKFQLAKKS
TTPYIPQRPGLLPGHQASVKTVVPILNQGTQSRYFLVQAGAVQTLTTVVPPQQPSFPTPA
LPKDRIPQEPSYQAPNDRLFYLSHNCSPDCLKRIRPAKHDQYCGRNPLLTPLLYEFRRMT
GRRRLNRKMSFHVIYKAPCGLCLRNMAEIERYLFQTHCDFIYLEMFCLDPYVLVDRRFQP
QRPFYFIRDITNSNEDIPLSCVNEIDNKPPPDVIYSKERLPADGVFINTNPEFLVGCDCT
DGCRDKSKCSCHQLTMQATGCTPGAQINGSAGYVNKRLEECLPTGIYECNKRCRCNHQMC
TNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDE
YFANLDHIESVENFKEGYESEAHCSDSEGSGVDMSRVKLSATPTLQTKASVKNEDNSSSG
NGGKGQADSSGEGEDDDNEESNEDDDDSSDDTFVKDTYFTSSSVWRSYTTRRQAKGMKEG
SQDSKDGMSMSTEGKEERKPPPMPEESGKSKVASWLSSSPATVTVKTEGLKTEKKEPVEA
KITVKTEGGKKPAGNTDVMSLSDSDDVQTISSGSDDNKEREKKTQALVKRQVAVKSTRGF
ALKTSHGMMVKTGPVKPQVEGPATGTGPTAPPQNTGGGGGGDAVSKSTRQFFDGEESCYI
IDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEV
GSVEGKELLCCCGSTECRGRLL
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagatggaggtggaggtggaggtggagagtttggagcgggagctggaggag
gagttgggcgtgtcgctggacgagctcaagcagtggatcgaggagcaggtggagaagagt
gaagtggtgcaacagaggaaagcccagctggctgaactctccacctgggtcgaacagagg
gagagagaggtggcttccgtggatagcctttgcctcaatgcttcagagtctgttgaagaa
tgtgaggagctggtgaaacaggtgtacatcaagaagggcctgacgtaccgggagagcagt
tcagaggacgagggagggagtgtggttgagacgtcggaggtcattgagatcgatgatgac
gacgatgatgacgtgatagccgtgggttgtttggtcccaccaaagacaatcactacgcca
gtgaaggaccccgtgctgaaggaggcgtctgcagcgctccagcgcagctcgcagcaagta
cagaagctcgctcagaccgtcaccagccctactgccccctcatctgccgtcggtctcagc
ccccccaaaccccccatggtcaccccgctccgctcgggggggctcaacgtcccggccgtg
tttgtctcgcaggcgccccgcaacacccccacccagcccaacctctccctcaaggaggac
accatgaaggtggacatgagcattctgggtaaaaaacgcaccaagacctggcacaaaggc
accctcatcgccatcaaatctgtgggtaacacgtttaagtacaaggtgaagtttgagaac
aaggggaagagtttactatctggcaaccacgttgcgttcgactacaaccccacccttgag
cgactgtatgtgggcgcccgtgtcgtcgccaagtataaggacggtaaccaagtgtggctg
tacgctggcgtcgtcgcagagatgcccaacagcaagaaccgtatgaggttcctgatcttt
tttgatgatggatatgcctcatatgtcagcctgccagaactctacccagtctgcagacca
atgaagtacacatgggaggacatagaggacgcgtcctgcaaggacttcattcaggagtac
atcacgtcctaccccaaccggcccatggtgcttctcaagcccagccagctcatcaagacc
gagtgggagggcacctggtggcggagccgcgtggaggaggtggacggcagcctcgtcaag
atcctcttcctggatgataaacgcagtgagtggatctaccgcggttctacacgtctagaa
cccatgttcaacctgaagatgaacactgctaacaaccaggagaaaaaggtggctggacag
ccaaggactcgtccaaatatgggagccttgaggagtaaagggcctgtggtccagtacacc
agtgagttcaggaccgcgccccagaccatgggccctcgacccctcgccacccagccagcc
gccccaaaacctgttcctgttcctcttcctgttcctctttctcttcctgttcctcatcct
gtccctgttccggtccccgtctccgtccctgtccctgtcctcgcccctgtcccccctgcg
cagactctccgctcagagagtccagacagtcggttcaaattccagttggctaaaaaaagc
accactccatacatcccccagcgcccagggttgctccccggccatcaggcttctgtgaag
acggtcgtgcccattcttaaccagggcacccagtccaggtatttcctggttcaggcgggt
gcggtgcagaccttgacgacggttgtccctccccaacagccgtccttcccgacacctgcc
ttacccaaggaccggatcccccaggagccgtcctaccaagcgcccaacgaccgcctcttc
tacctgtcgcacaactgctcgcccgactgcctgaagcggatccgaccggccaaacatgat
cagtactgcggacgcaacccgctgctcacacccctgctctacgagtttcgccgcatgacc
ggacgccggcggctcaaccgcaagatgtcgttccacgtcatctacaaggccccgtgtggg
ctgtgcctgcgcaacatggcggagatcgagcgctacctgttccagacgcactgcgacttc
atctacctggagatgttctgcctggacccgtacgtgctggtggaccggcgcttccagccg
cagcggcccttctacttcatccgcgacatcaccaacagcaacgaggacatcccgctctcc
tgcgtcaacgagatcgacaacaagccgcctcccgacgtgatttacagcaaggagcgcctc
cccgccgacggtgtcttcatcaacaccaaccccgaattcctggtgggctgcgactgcacc
gacggctgcagggacaagtctaagtgctcgtgtcaccagctgaccatgcaggctactggc
tgtactcctggagcacagatcaacggcagcgccggctacgtcaacaaacggctggaggag
tgtctgcccacagggatatacgagtgcaacaagcgctgccgctgtaaccatcagatgtgc
actaacaggctggtgcagcacggtctgcaagttcgccttcagctcttcaagacccagaac
aagggctggggcatccgttgcctcgacgacgttgccaagggctcctttgtctgtatctat
gcaggcaagatcctgactgatgactttgctgataaggagggcctggagatgggcgatgag
tactttgccaacctggaccacatcgagagtgtggagaacttcaaggagggctacgagagc
gaggcgcactgctccgacagcgagggcagcggagtggacatgagccgtgtcaaactcagc
gccacccccaccctccagaccaaagcctccgtcaagaacgaggacaacagcagtagcggc
aacggcggcaaaggccaagctgattcctcaggagagggagaggatgacgataacgaggag
tctaacgaggatgatgatgacagctcagacgacacgtttgtgaaggacacatactttaca
tccagctctgtgtggagaagctacaccacgcgcagacaggccaagggcatgaaggaaggg
agccaggacagtaaggatggcatgagcatgtccacggagggcaaggaggagaggaagccg
ccgcccatgccggaggagagcgggaagagtaaagtggcctcgtggctcagctcctcgccc
gccactgtcacggtcaaaacagagggcctgaagactgagaagaaggagccagtggaagcc
aagataactgtgaaaactgagggtgggaaaaagccagctggaaacacggatgtgatgagc
ctctctgacagtgacgatgttcagaccatcagctcaggctcagatgacaacaaggagcgt
gagaagaagactcaggcattggtaaagagacaggtagcggtaaagtctacgcggggcttc
gctctgaagacctcccatggtatgatggtgaagacggggccggtgaaaccccaggtggaa
gggccagcgacggggacggggcccaccgcccccccgcagaacacaggtgggggaggaggg
ggtgacgcggtctccaagtccacacgacagtttttcgatggagaggagtcctgttacatc
atcgacgccaaattggagggcaacctcggacgctacctcaatcacagctgcagtcctaat
ctctttgtccagaacgtgtttgtggacactcatgacctgcgcttcccttgggtagccttc
tttgccagcaagcgtatccgggcgggcacagagctgacgtgggattataactacgaggtt
ggcagcgtggagggcaaggagctgctgtgctgctgcggctccacagagtgcagagggcgc
ctgctgtag
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integrated database retrieval system
